RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 GPR88Q9GZN0 384 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 MARCH5Q9NX47 278 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 DERAQ9Y315 318 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 PPEF2O14830 753 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 CEP104O60308 925 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 SPOUT1Q5T280 376 aaKnown RBP18.45■□□□□ 0.54
SHOX-204ENST00000554971 GJB7Q6PEY0 223 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 CD300LGQ6UXG3 332 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 MAATS1Q7Z4T9 603 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 DAAM2Q86T65 1068 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 CCDC26Q8TAB7 109 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 MTMR12Q9C0I1 747 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 UBQLN1Q9UMX0 589 aaKnown RBP18.45■□□□□ 0.54
SHOX-204ENST00000554971 PRG3Q9Y2Y8 225 aaPredicted RBP18.45■□□□□ 0.54
SHOX-204ENST00000554971 C5orf67F2Z3F1 127 aa18.44■□□□□ 0.54
SHOX-204ENST00000554971 LAG3P18627 525 aa18.44■□□□□ 0.54
SHOX-204ENST00000554971 CTNNB1P35222 781 aa18.44■□□□□ 0.54
SHOX-204ENST00000554971 TFAMQ00059 246 aaKnown RBP18.44■□□□□ 0.54
SHOX-204ENST00000554971 C1orf127Q8N9H9 656 aa18.44■□□□□ 0.54
SHOX-204ENST00000554971 OLIG1Q8TAK6 271 aa18.44■□□□□ 0.54
SHOX-204ENST00000554971 GDAP1L1Q96MZ0 367 aa18.44■□□□□ 0.54
SHOX-204ENST00000554971 FAM193BQ96PV7 902 aaPredicted RBP18.44■□□□□ 0.54
SHOX-204ENST00000554971 VN1R3Q9BXE9 311 aa18.44■□□□□ 0.54
SHOX-204ENST00000554971 ZNF576Q9H609 170 aa18.44■□□□□ 0.54
SHOX-204ENST00000554971 SLC38A7Q9NVC3 462 aa18.44■□□□□ 0.54
SHOX-204ENST00000554971 PACSIN2Q9UNF0 486 aaPredicted RBP18.44■□□□□ 0.54
SHOX-204ENST00000554971 A0A0C4DFX4 3053 aa18.44■□□□□ 0.54
SHOX-204ENST00000554971 TULP1O00294 542 aaPredicted RBP18.43■□□□□ 0.54
SHOX-204ENST00000554971 TRIM49P0CI25 452 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 TRIM49CP0CI26 452 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 CYP3A5P20815 502 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 OR1G1P47890 313 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 ALDH7A1P49419 539 aaKnown RBP18.43■□□□□ 0.54
SHOX-204ENST00000554971 CARSP49589 748 aaKnown RBP18.43■□□□□ 0.54
SHOX-204ENST00000554971 CFAP58Q5T655 872 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 EMC10Q5UCC4 262 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 NT5DC4Q86YG4 428 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 WDR49Q8IV35 697 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 GLYCTKQ8IVS8 523 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 SLC39A11Q8N1S5 342 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 KLHL23Q8NBE8 558 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 ZNF558Q96NG5 402 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 TSPAN18Q96SJ8 248 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 CGRRF1Q99675 332 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 AGPAT1Q99943 283 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 TMEM175Q9BSA9 504 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 TMCO5BA8MYB1 307 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 EFEMP2O95967 443 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 ALDH2P05091 517 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 LRPAP1P30533 357 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 HSPA9P38646 679 aaKnown RBP18.43■□□□□ 0.54
SHOX-204ENST00000554971 USP37Q86T82 979 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 SLC35G2Q8TBE7 412 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 TMC2Q8TDI7 906 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 ARNTL2Q8WYA1 636 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 LRRC45Q96CN5 670 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 IGSF21Q96ID5 467 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 FNBP1Q96RU3 617 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 CARD9Q9H257 536 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 SIX4Q9UIU6 781 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 NFU1Q9UMS0 254 aa18.43■□□□□ 0.54
SHOX-204ENST00000554971 RAD51CO43502 376 aa18.42■□□□□ 0.54
SHOX-204ENST00000554971 TNNI1P19237 187 aa18.42■□□□□ 0.54
SHOX-204ENST00000554971 PPP3CAQ08209 521 aa18.42■□□□□ 0.54
SHOX-204ENST00000554971 PHLDB3Q6NSJ2 640 aa18.42■□□□□ 0.54
SHOX-204ENST00000554971 LRIG3Q6UXM1 1119 aa18.42■□□□□ 0.54
SHOX-204ENST00000554971 HASPINQ8TF76 798 aa18.42■□□□□ 0.54
SHOX-204ENST00000554971 CASKIN2Q8WXE0 1202 aa18.42■□□□□ 0.54
SHOX-204ENST00000554971 ALG13Q9NP73 1137 aaKnown RBP18.42■□□□□ 0.54
SHOX-204ENST00000554971 DPP3Q9NY33 737 aa18.42■□□□□ 0.54
SHOX-204ENST00000554971 MIF4GDA9UHW6 222 aaKnown RBP18.41■□□□□ 0.54
SHOX-204ENST00000554971 RFXAPO00287 272 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 KRIT1O00522 736 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 PODXLO00592 558 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 SART1O43290 800 aaKnown RBP18.41■□□□□ 0.54
SHOX-204ENST00000554971 LPXNO60711 386 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 FGF18O76093 207 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 GZMAP12544 262 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 DNAJB1P25685 340 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 SKOR1P84550 965 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 CAMK1Q14012 370 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 SURF1Q15526 300 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 C9orf57Q5W0N0 161 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 IFT81Q8WYA0 676 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 SEC14L1Q92503 715 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 PLVAPQ9BX97 442 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 RWDD3Q9Y3V2 267 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 PCDHB12Q9Y5F1 795 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 FOXN3O00409 490 aaPredicted RBP18.41■□□□□ 0.54
SHOX-204ENST00000554971 PIRO00625 290 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 GTF2H1P32780 548 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 DNA2P51530 1060 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 DUOXA2Q1HG44 320 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 TDRD10Q5VZ19 366 aaKnown RBP18.41■□□□□ 0.54
SHOX-204ENST00000554971 C11orf63Q6NUN7 778 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 C15orf39Q6ZRI6 1047 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 TSEN2Q8NCE0 465 aaKnown RBP18.41■□□□□ 0.54
SHOX-204ENST00000554971 BEST2Q8NFU1 509 aa18.41■□□□□ 0.54
SHOX-204ENST00000554971 RIN2Q8WYP3 895 aaPredicted RBP18.41■□□□□ 0.54
SHOX-204ENST00000554971 FAM81BQ96LP2 452 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms