RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 ITGB8P26012 769 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 CSF2RBP32927 897 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 GJA4P35212 333 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 CDK7P50613 346 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 PPP2CBP62714 309 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 PPP2CAP67775 309 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 ADAM17P78536 824 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 BEX3Q00994 111 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 TNFAIP2Q03169 654 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 PUM1Q14671 1186 aaKnown RBP eCLIP4.79□□□□□ -1.641e-6■□□□□ 9.7
VTI1B-203ENST00000554636 ICAM4Q14773 271 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 WTAPQ15007 396 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 SURF1Q15526 300 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 DUSP28Q4G0W2 176 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 ZC3H12BQ5HYM0 836 aaKnown RBP4.79□□□□□ -1.64
VTI1B-203ENST00000554636 IQSEC1Q6DN90 963 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 ABHD17CQ6PCB6 329 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 LRSAM1Q6UWE0 723 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 CHST3Q7LGC8 479 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 ANKRD33Q7Z3H0 272 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 NOSTRINQ8IVI9 506 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 TDHQ8IZJ6 230 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 IGSF22Q8N9C0 903 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 DNERQ8NFT8 737 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 ERCC4Q92889 916 aaPredicted RBP4.79□□□□□ -1.64
VTI1B-203ENST00000554636 TRIM43Q96BQ3 446 aaPredicted RBP4.79□□□□□ -1.64
VTI1B-203ENST00000554636 TAAR1Q96RJ0 339 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 MAF1Q9H063 256 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 RIOX1Q9H6W3 641 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 SPC25Q9HBM1 224 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 NCOA5Q9HCD5 579 aaKnown RBP4.79□□□□□ -1.64
VTI1B-203ENST00000554636 VAT1LQ9HCJ6 419 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 STARD7Q9NQZ5 370 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 TBX21Q9UL17 535 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 LAMA2P24043 3122 aaKnown RBP4.79□□□□□ -1.64
VTI1B-203ENST00000554636 ELP1O95163 1332 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 FRMPD4Q14CM0 1322 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 A0A0U1RQG5 324 aaPredicted RBP4.78□□□□□ -1.64
VTI1B-203ENST00000554636 TCRBV16S1A1N1A0A5B0 115 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 ERICH2A1L162 156 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 ZBTB5O15062 677 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 PRC1O43663 620 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 DHX16O60231 1041 aaKnown RBP4.78□□□□□ -1.64
VTI1B-203ENST00000554636 CLASP2O75122 1294 aaKnown RBP4.78□□□□□ -1.64
VTI1B-203ENST00000554636 CDC45O75419 566 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 PLEKHA8P1O95397 391 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 ASGR1P07306 291 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 RXRAP19793 462 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 AOAHP28039 575 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 HSD17B4P51659 736 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 KCNQ1P51787 676 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 EPHB4P54760 987 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 IL13RA1P78552 427 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 SART3Q15020 963 aaKnown RBP4.78□□□□□ -1.64
VTI1B-203ENST00000554636 PPP2R5BQ15173 497 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 FSCN1Q16658 493 aaKnown RBP4.78□□□□□ -1.64
VTI1B-203ENST00000554636 LRIT3Q3SXY7 679 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 ZNF568Q3ZCX4 644 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 TRIM61Q5EBN2 209 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 C9orf50Q5SZB4 431 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 ZNF585AQ6P3V2 769 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 CCDC62Q6P9F0 684 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 CXCL17Q6UXB2 119 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 OVCH1Q7RTY7 1134 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 SGMS1Q86VZ5 419 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 CIR1Q86X95 450 aaPredicted RBP4.78□□□□□ -1.64
VTI1B-203ENST00000554636 RAB11FIP4Q86YS3 637 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 PCSK9Q8NBP7 692 aaKnown RBP4.78□□□□□ -1.64
VTI1B-203ENST00000554636 HIPK4Q8NE63 616 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 OR6J1Q8NGC5 347 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 IL31RAQ8NI17 732 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 NUP133Q8WUM0 1156 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 BADQ92934 168 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 MRFAP1L1Q96HT8 127 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 GLT1D1Q96MS3 346 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 GNRHR2Q96P88 292 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 PIGSQ96S52 555 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 MAP3K14Q99558 947 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 MYL10Q9BUA6 226 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 SSBP3Q9BWW4 388 aaPredicted RBP4.78□□□□□ -1.64
VTI1B-203ENST00000554636 AMNQ9BXJ7 453 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 MRPL4Q9BYD3 311 aaKnown RBP4.78□□□□□ -1.64
VTI1B-203ENST00000554636 CELF4Q9BZC1 486 aaKnown RBP4.78□□□□□ -1.64
VTI1B-203ENST00000554636 WDR11Q9BZH6 1224 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 PXMP2Q9NR77 195 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 CDC42EP3Q9UKI2 254 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 CNOT11Q9UKZ1 510 aaKnown RBP4.78□□□□□ -1.64
VTI1B-203ENST00000554636 MRPL11Q9Y3B7 192 aaKnown RBP4.78□□□□□ -1.64
VTI1B-203ENST00000554636 Q9Y3F1 56 aa4.78□□□□□ -1.64
VTI1B-203ENST00000554636 TANC1Q9C0D5 1861 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 MROH7Q68CQ1 1323 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 SLC12A8A0AV02 714 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 GPR42O15529 346 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 ZEB2O60315 1214 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 CABYRO75952 493 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 CNOT4O95628 575 aaKnown RBP4.77□□□□□ -1.65
VTI1B-203ENST00000554636 CD4P01730 458 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 ZNF20P17024 532 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 MCM5P33992 734 aa4.77□□□□□ -1.65
VTI1B-203ENST00000554636 LIFRP42702 1097 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms