RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ARHGAP15Q53QZ3 475 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 SCARA3Q6AZY7 606 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 FAM171BQ6P995 826 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 VITQ6UXI7 678 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 OSTM1Q86WC4 334 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 MFSD6LQ8IWD5 586 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 DTWD2Q8NBA8 298 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 ST13P5Q8NFI4 369 aaPredicted RBP11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 FAM200AQ8TCP9 573 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 PARD3BQ8TEW8 1205 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 KBTBD7Q8WVZ9 684 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 IRF7Q92985 503 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 CEP295NLQ96MC4 621 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 ZSWIM3Q96MP5 696 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 LPIN3Q9BQK8 851 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 TRMT61BQ9BVS5 477 aaKnown RBP11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 PLA2G2FQ9BZM2 168 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 GOLPH3LQ9H4A5 285 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 SLITRK6Q9H5Y7 841 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 VRTNQ9H8Y1 702 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 ZNF334Q9HCZ1 680 aaPredicted RBP11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 TMLHEQ9NVH6 421 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 OBP2AQ9NY56 170 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 DLGAP2Q9P1A6 1054 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 CDH9Q9ULB4 789 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 LHX6Q9UPM6 363 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 TRAF3IP3Q9Y228 551 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 SIT1Q9Y3P8 196 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 DNAH14Q0VDD8 3507 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 HELZP42694 1942 aaKnown RBP11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 CACNA1IQ9P0X4 2223 aa11.15□□□□□ -0.63
PTCD2P1-201ENST00000554393 MAPK13O15264 365 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 CALUO43852 315 aaPredicted RBP11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 ZNF202O95125 648 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 NR3C1P04150 777 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 CSH1P0DML2 217 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 CSH2P0DML3 217 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 DDX6P26196 483 aaKnown RBP eCLIP11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 MAGEA9P43362 315 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 MAGEA11P43364 429 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 EMP3P54852 163 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 MLLT6P55198 1093 aaPredicted RBP11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 ENPEPQ07075 957 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 FCHO2Q0JRZ9 810 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 SNW1Q13573 536 aaKnown RBP11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 TAF12Q16514 161 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 C4orf50Q6ZRC1 276 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 GUF1Q8N442 669 aaKnown RBP11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 SYAP1Q96A49 352 aaPredicted RBP11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 TRMT2BQ96GJ1 504 aaKnown RBP11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 NELL2Q99435 816 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 SYT15Q9BQS2 421 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 MKNK1Q9BUB5 465 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 XYLT2Q9H1B5 865 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 ATXN3LQ9H3M9 355 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 TASP1Q9H6P5 420 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 BRD9Q9H8M2 597 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 IL21Q9HBE4 155 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 UXTQ9UBK9 157 aaPredicted RBP11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 GTF3C4Q9UKN8 822 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 COL4A3Q01955 1670 aa11.14□□□□□ -0.63
PTCD2P1-201ENST00000554393 HEPACAM2A8MVW5 462 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 PROB1E7EW31 1015 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 H0Y858 1186 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 NOL4O94818 638 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 CST3P01034 146 aaPredicted RBP11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 GLULP15104 373 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 HMGA1P17096 107 aaKnown RBP11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 ACAT1P24752 427 aaKnown RBP11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 VIPR2P41587 438 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 ID4P47928 161 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 TNNC1P63316 161 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 TRPC3Q13507 836 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 GRM2Q14416 872 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 WDR72Q3MJ13 1102 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 STXBP5Q5T5C0 1151 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 GPR158Q5T848 1215 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 VSTM1Q6UX27 236 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 TPRG1Q6ZUI0 275 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 SPATA2LQ8IUW3 424 aaPredicted RBP11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 ARID3BQ8IVW6 561 aaPredicted RBP11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 FMR1NBQ8N0W7 255 aaPredicted RBP11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 PLEKHO2Q8TD55 490 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 ZNF516Q92618 1163 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 ATOH1Q92858 354 aaPredicted RBP11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 MSANTD3Q96H12 275 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 MYRFLQ96LU7 910 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 MMS19Q96T76 1030 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 PI4K2AQ9BTU6 479 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 GDPD2Q9HCC8 539 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 FRMD4BQ9Y2L6 1034 aa11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 MRPS17Q9Y2R5 130 aaKnown RBP11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 RIF1Q5UIP0 2472 aaKnown RBP11.13□□□□□ -0.63
PTCD2P1-201ENST00000554393 NCANO14594 1321 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 MYBPHLA2RUH7 354 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 GOLGA6L4A6NEF3 574 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 LRRIQ3A6PVS8 624 aaPredicted RBP11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 ARNTLO00327 626 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 MAN2B1O00754 1011 aa11.12□□□□□ -0.63
PTCD2P1-201ENST00000554393 IKBKBO14920 756 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms