RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 ZNF276Q8N554 614 aa17.76■□□□□ 0.43
PPP4R3A-202ENST00000554390 CHURC1Q8WUH1 139 aa17.76■□□□□ 0.43
PPP4R3A-202ENST00000554390 CCDC28BQ9BUN5 200 aa17.76■□□□□ 0.43
PPP4R3A-202ENST00000554390 TMEM120AQ9BXJ8 343 aa17.76■□□□□ 0.43
PPP4R3A-202ENST00000554390 STK32BQ9NY57 414 aa17.76■□□□□ 0.43
PPP4R3A-202ENST00000554390 ZNF536O15090 1300 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 ZNF862O60290 1169 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 INHBCP55103 352 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 CENPCQ03188 943 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 DMP1Q13316 513 aaPredicted RBP17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 ORC1Q13415 861 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 RBM12BQ8IXT5 1001 aaKnown RBP17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 TTC1Q99614 292 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 MANSC1Q9H8J5 431 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 KCNK13Q9HB14 408 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 ETNK2Q9NVF9 386 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 GABBR1Q9UBS5 961 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 PCDHB4Q9Y5E5 795 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 LRRC37AA6NMS7 1700 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 A6NJR5 290 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 PEX10O60683 326 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 BAG2O95816 211 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 CDK16Q00536 496 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 CYP24A1Q07973 514 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 CYP4A22Q5TCH4 519 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 TMEM143Q96AN5 459 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 HIC2Q96JB3 615 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 CYTH2Q99418 400 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 APOBEC3GQ9HC16 384 aaKnown RBP17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 C1orf112Q9NSG2 853 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 ARMCX1Q9P291 453 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 IVNS1ABPQ9Y6Y0 642 aa17.75■□□□□ 0.43
PPP4R3A-202ENST00000554390 DNAJC6O75061 913 aa17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 KLRC2P26717 231 aa17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 ALDH1B1P30837 517 aa17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 USP46P62068 366 aa17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 CCNG2Q16589 344 aa17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 EAPPQ56P03 285 aaPredicted RBP17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 ARHGAP24Q8N264 748 aa17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 TCP10LQ8TDR4 215 aa17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 OLFM3Q96PB7 478 aa17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 TJP2Q9UDY2 1190 aa17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 CDC16Q13042 620 aa17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 KLF1Q13351 362 aaPredicted RBP17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 SMAD1Q15797 465 aaKnown RBP17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 TDRD10Q5VZ19 366 aaKnown RBP17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 DPY19L2Q6NUT2 758 aa17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 SWSAP1Q6NVH7 229 aa17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 ST13P4Q8IZP2 240 aaPredicted RBP17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 STKLD1Q8NE28 680 aa17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 VTI1AQ96AJ9 217 aa17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 RIT2Q99578 217 aa17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 TSSK1BQ9BXA7 367 aa17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 PSMC3IPQ9P2W1 217 aaPredicted RBP17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 TBC1D30Q9Y2I9 924 aa17.74■□□□□ 0.43
PPP4R3A-202ENST00000554390 COQ9O75208 318 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 USP1O94782 785 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 MAP3K6O95382 1288 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 HLA-DRAP01903 254 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 CRABP2P29373 138 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 CAP2P40123 477 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 RAP1GDS1P52306 607 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 PDIA2Q13087 525 aaKnown RBP17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 KRT72Q14CN4 511 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 MTERF2Q49AM1 385 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 SCARA5Q6ZMJ2 495 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 CEP128Q6ZU80 1094 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 NAT14Q8WUY8 206 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 PLEKHG4BQ96PX9 1271 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 FOXP3Q9BZS1 431 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 NDE1Q9NXR1 346 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 IL1RAPL1Q9NZN1 696 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 SLC17A7Q9P2U7 560 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 MTO1Q9Y2Z2 717 aaKnown RBP17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 RIPK3Q9Y572 518 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 B2RBV5 119 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 GPC3P51654 580 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 HIRAP54198 1017 aaPredicted RBP17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 MAMLD1Q13495 774 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 SMC1BQ8NDV3 1235 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 CLEC4DQ8WXI8 215 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 PPP2R3CQ969Q6 453 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 RMDN3Q96TC7 470 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 EBF3Q9H4W6 596 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 ARHGEF4Q9NR80 690 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 KCND2Q9NZV8 630 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 SEPT9Q9UHD8 586 aaPredicted RBP17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 NRXN2Q9P2S2 1712 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 F8W8V4 182 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 SGK1O00141 431 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 OPHN1O60890 802 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 KRT1P04264 644 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 FAM200BP0CF97 657 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 GDF10P55107 478 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 ANKRD22Q5VYY1 191 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 RIPOR1Q6ZS17 1223 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 OR5B17Q8NGF7 314 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 FBXO27Q8NI29 283 aa17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 SYTL5Q8TDW5 730 aaPredicted RBP17.73■□□□□ 0.43
PPP4R3A-202ENST00000554390 MCEEQ96PE7 176 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms