RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CCDC142Q17RM4 750 aa13.95□□□□□ -0.18
SHMT2-211ENST00000554310 C1orf220Q5T0J3 134 aa13.95□□□□□ -0.18
SHMT2-211ENST00000554310 CWF19L1Q69YN2 538 aaKnown RBP13.95□□□□□ -0.18
SHMT2-211ENST00000554310 ASTLQ6HA08 431 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-211ENST00000554310 POTEHQ6S545 545 aa13.95□□□□□ -0.18
SHMT2-211ENST00000554310 VSTM1Q6UX27 236 aa13.95□□□□□ -0.18
SHMT2-211ENST00000554310 OR6B3Q8NGW1 331 aa13.95□□□□□ -0.18
SHMT2-211ENST00000554310 MYCBPAPQ8TBZ2 947 aa13.95□□□□□ -0.18
SHMT2-211ENST00000554310 GIPC2Q8TF65 315 aa13.95□□□□□ -0.18
SHMT2-211ENST00000554310 DEPDC1BQ8WUY9 529 aa13.95□□□□□ -0.18
SHMT2-211ENST00000554310 ERCC4Q92889 916 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-211ENST00000554310 MYLPFQ96A32 169 aa13.95□□□□□ -0.18
SHMT2-211ENST00000554310 E2F7Q96AV8 911 aa13.95□□□□□ -0.18
SHMT2-211ENST00000554310 CEP295NLQ96MC4 621 aa13.95□□□□□ -0.18
SHMT2-211ENST00000554310 ATXN3LQ9H3M9 355 aa13.95□□□□□ -0.18
SHMT2-211ENST00000554310 IL21Q9HBE4 155 aa13.95□□□□□ -0.18
SHMT2-211ENST00000554310 CRTAC1Q9NQ79 661 aa13.95□□□□□ -0.18
SHMT2-211ENST00000554310 NXF1Q9UBU9 619 aaKnown RBP13.95□□□□□ -0.18
SHMT2-211ENST00000554310 COL4A2P08572 1712 aa13.95□□□□□ -0.18
SHMT2-211ENST00000554310 GREB1Q4ZG55 1949 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 A8MXQ7 604 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 PSMA7O14818 248 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 ATP2C2O75185 946 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 NOL4O94818 638 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 ASS1P00966 412 aaKnown RBP13.94□□□□□ -0.18
SHMT2-211ENST00000554310 PDGFRBP09619 1106 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 TRIM49P0CI25 452 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 TRIM49CP0CI26 452 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 EPB41P11171 864 aaKnown RBP13.94□□□□□ -0.18
SHMT2-211ENST00000554310 HMGA1P17096 107 aaKnown RBP13.94□□□□□ -0.18
SHMT2-211ENST00000554310 AOC1P19801 751 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 RFX1P22670 979 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 CYP2F1P24903 491 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 AVPR2P30518 371 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 GTF2H1P32780 548 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 MCCD1P59942 119 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-211ENST00000554310 SGSM1Q2NKQ1 1148 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 TANGO2Q6ICL3 276 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 ZC3H3Q8IXZ2 948 aaKnown RBP13.94□□□□□ -0.18
SHMT2-211ENST00000554310 ADSSL1Q8N142 457 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 FLCNQ8NFG4 579 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 DNASE1L2Q92874 299 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 TRMT2BQ96GJ1 504 aaKnown RBP13.94□□□□□ -0.18
SHMT2-211ENST00000554310 PCED1BQ96HM7 432 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 ZSWIM3Q96MP5 696 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 IMPG2Q9BZV3 1241 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 SMYD3Q9H7B4 428 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 MAGEC2Q9UBF1 373 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-211ENST00000554310 UXTQ9UBK9 157 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-211ENST00000554310 CA14Q9ULX7 337 aa13.94□□□□□ -0.18
SHMT2-211ENST00000554310 KRBA1A5PL33 1030 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 SOBPA7XYQ1 873 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 STX10O60499 249 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 HLA-DRAP01903 254 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 NPR3P17342 541 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 PSMC3P17980 439 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 WEE1P30291 646 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 GCLMP48507 274 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 GPR15P49685 360 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 FKBP3Q00688 224 aaKnown RBP13.93□□□□□ -0.18
SHMT2-211ENST00000554310 CYP27A1Q02318 531 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 PPP3CAQ08209 521 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 DDR2Q16832 855 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 MDH1BQ5I0G3 518 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 STXBP5Q5T5C0 1151 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 GPR158Q5T848 1215 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 SCARA5Q6ZMJ2 495 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 SCN4BQ8IWT1 228 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 B3GALNT2Q8NCR0 500 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 DHTKD1Q96HY7 919 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-211ENST00000554310 SHDQ96IW2 340 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 MYRFLQ96LU7 910 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 ELOVL4Q9GZR5 314 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 TSPY26PQ9H489 355 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 TASP1Q9H6P5 420 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 TBC1D17Q9HA65 648 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 TMEM8AQ9HCN3 771 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 MAN1B1Q9UKM7 699 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 NME7Q9Y5B8 376 aa13.93□□□□□ -0.18
SHMT2-211ENST00000554310 KIF26AQ9ULI4 1882 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-211ENST00000554310 F5P12259 2224 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 ATP8B3O60423 1300 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 MIA3Q5JRA6 1907 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 SLC38A8A6NNN8 435 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 TRIM66O15016 1216 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 PTPN1P18031 435 aaKnown RBP13.92□□□□□ -0.18
SHMT2-211ENST00000554310 DDX6P26196 483 aaKnown RBP eCLIP13.92□□□□□ -0.18
SHMT2-211ENST00000554310 ANXA13P27216 316 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 PLA2G5P39877 138 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 VIPR2P41587 438 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 ASPAP45381 313 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 RAP1GAPP47736 663 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 MXI1P50539 228 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 NLRP12P59046 1061 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 NOP14P78316 857 aaKnown RBP13.92□□□□□ -0.18
SHMT2-211ENST00000554310 CYP4F8P98187 520 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 PRKCQQ04759 706 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 MLF2Q15773 248 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-211ENST00000554310 SDHAF4Q5VUM1 108 aa13.92□□□□□ -0.18
SHMT2-211ENST00000554310 KRT39Q6A163 491 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms