RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 FAM181AQ8N9Y4 354 aa18.31■□□□□ 0.52
NEK9-204ENST00000554258 FOXD4L4Q8WXT5 416 aaPredicted RBP18.31■□□□□ 0.52
NEK9-204ENST00000554258 DYDC2Q96IM9 177 aa18.31■□□□□ 0.52
NEK9-204ENST00000554258 CCDC43Q96MW1 224 aaKnown RBP18.31■□□□□ 0.52
NEK9-204ENST00000554258 ECT2Q9H8V3 914 aa18.31■□□□□ 0.52
NEK9-204ENST00000554258 PCOLCE2Q9UKZ9 415 aa18.31■□□□□ 0.52
NEK9-204ENST00000554258 USP20Q9Y2K6 914 aa18.31■□□□□ 0.52
NEK9-204ENST00000554258 MORC2Q9Y6X9 1032 aaPredicted RBP18.31■□□□□ 0.52
NEK9-204ENST00000554258 MYO18AQ92614 2054 aaKnown RBP18.3■□□□□ 0.52
NEK9-204ENST00000554258 CBFA2T3O75081 653 aa18.3■□□□□ 0.52
NEK9-204ENST00000554258 LIG1P18858 919 aa18.3■□□□□ 0.52
NEK9-204ENST00000554258 ATP2B1P20020 1258 aa18.3■□□□□ 0.52
NEK9-204ENST00000554258 RPL6Q02878 288 aaKnown RBP18.3■□□□□ 0.52
NEK9-204ENST00000554258 MAP7D1Q3KQU3 841 aa18.3■□□□□ 0.52
NEK9-204ENST00000554258 TMEM92Q6UXU6 159 aa18.3■□□□□ 0.52
NEK9-204ENST00000554258 TPH2Q8IWU9 490 aa18.3■□□□□ 0.52
NEK9-204ENST00000554258 HAS1Q92839 578 aa18.3■□□□□ 0.52
NEK9-204ENST00000554258 USP13Q92995 863 aaPredicted RBP18.3■□□□□ 0.52
NEK9-204ENST00000554258 FAM20AQ96MK3 541 aa18.3■□□□□ 0.52
NEK9-204ENST00000554258 PNMA5Q96PV4 448 aa18.3■□□□□ 0.52
NEK9-204ENST00000554258 ZMYM5Q9UJ78 669 aa18.3■□□□□ 0.52
NEK9-204ENST00000554258 SOAT2O75908 522 aa18.29■□□□□ 0.52
NEK9-204ENST00000554258 WISP1O95388 367 aa18.29■□□□□ 0.52
NEK9-204ENST00000554258 HNRNPLP14866 589 aaKnown RBP eCLIP18.29■□□□□ 0.52
NEK9-204ENST00000554258 MCM7P33993 719 aa18.29■□□□□ 0.52
NEK9-204ENST00000554258 YWHAHQ04917 246 aaPredicted RBP18.29■□□□□ 0.52
NEK9-204ENST00000554258 CDCA2Q69YH5 1023 aaPredicted RBP18.29■□□□□ 0.52
NEK9-204ENST00000554258 NCAPH2Q6IBW4 605 aa18.29■□□□□ 0.52
NEK9-204ENST00000554258 CENPPQ6IPU0 288 aa18.29■□□□□ 0.52
NEK9-204ENST00000554258 PGBD3Q8N328 593 aa18.29■□□□□ 0.52
NEK9-204ENST00000554258 SETD7Q8WTS6 366 aaKnown RBP18.29■□□□□ 0.52
NEK9-204ENST00000554258 TMEM60Q9H2L4 133 aa18.29■□□□□ 0.52
NEK9-204ENST00000554258 KIF9Q9HAQ2 790 aa18.29■□□□□ 0.52
NEK9-204ENST00000554258 TDP1Q9NUW8 608 aa18.29■□□□□ 0.52
NEK9-204ENST00000554258 PCDHB8Q9UN66 801 aa18.29■□□□□ 0.52
NEK9-204ENST00000554258 FAM149AA5PLN7 773 aa18.28■□□□□ 0.52
NEK9-204ENST00000554258 NEMFO60524 1076 aa18.28■□□□□ 0.52
NEK9-204ENST00000554258 BMP15O95972 392 aa18.28■□□□□ 0.52
NEK9-204ENST00000554258 RPL9P32969 192 aaKnown RBP18.28■□□□□ 0.52
NEK9-204ENST00000554258 EIF2S3P41091 472 aaKnown RBP18.28■□□□□ 0.52
NEK9-204ENST00000554258 NASPP49321 788 aaPredicted RBP18.28■□□□□ 0.52
NEK9-204ENST00000554258 YARSP54577 528 aaKnown RBP18.28■□□□□ 0.52
NEK9-204ENST00000554258 ZNF33AQ06730 810 aa18.28■□□□□ 0.52
NEK9-204ENST00000554258 PLEKHG6Q3KR16 790 aa18.28■□□□□ 0.52
NEK9-204ENST00000554258 TAF1BQ53T94 588 aaPredicted RBP18.28■□□□□ 0.52
NEK9-204ENST00000554258 PCSK4Q6UW60 755 aa18.28■□□□□ 0.52
NEK9-204ENST00000554258 POTEDQ86YR6 584 aa18.28■□□□□ 0.52
NEK9-204ENST00000554258 MAB21L3Q8N8X9 362 aa18.28■□□□□ 0.52
NEK9-204ENST00000554258 HMGB4Q8WW32 186 aa18.28■□□□□ 0.52
NEK9-204ENST00000554258 ZNF396Q96N95 335 aaPredicted RBP18.28■□□□□ 0.52
NEK9-204ENST00000554258 USP28Q96RU2 1077 aa18.28■□□□□ 0.52
NEK9-204ENST00000554258 ARID3AQ99856 593 aa18.28■□□□□ 0.52
NEK9-204ENST00000554258 C2orf40Q9H1Z8 148 aa18.28■□□□□ 0.52
NEK9-204ENST00000554258 TOPORSQ9NS56 1045 aaPredicted RBP18.28■□□□□ 0.52
NEK9-204ENST00000554258 ATP6V1DQ9Y5K8 247 aa18.28■□□□□ 0.52
NEK9-204ENST00000554258 CLIC4Q9Y696 253 aa18.28■□□□□ 0.52
NEK9-204ENST00000554258 CABIN1Q9Y6J0 2220 aa18.28■□□□□ 0.52
NEK9-204ENST00000554258 OBSL1O75147 1896 aa18.28■□□□□ 0.52
NEK9-204ENST00000554258 GOLGA8CPA6NN73 597 aa18.27■□□□□ 0.52
NEK9-204ENST00000554258 K7EQS6 105 aa18.27■□□□□ 0.52
NEK9-204ENST00000554258 LAD1O00515 517 aa18.27■□□□□ 0.52
NEK9-204ENST00000554258 RRP8O43159 456 aaKnown RBP18.27■□□□□ 0.52
NEK9-204ENST00000554258 PRPHP41219 470 aa18.27■□□□□ 0.52
NEK9-204ENST00000554258 ATP2C1P98194 919 aaPredicted RBP18.27■□□□□ 0.52
NEK9-204ENST00000554258 GPR17Q13304 367 aa18.27■□□□□ 0.52
NEK9-204ENST00000554258 VEPH1Q14D04 833 aa18.27■□□□□ 0.52
NEK9-204ENST00000554258 SF3A1Q15459 793 aaKnown RBP18.27■□□□□ 0.52
NEK9-204ENST00000554258 MAEAQ7L5Y9 396 aa18.27■□□□□ 0.52
NEK9-204ENST00000554258 TTC9BQ8N6N2 239 aa18.27■□□□□ 0.52
NEK9-204ENST00000554258 ATAD1Q8NBU5 361 aa18.27■□□□□ 0.52
NEK9-204ENST00000554258 RIN3Q8TB24 985 aa18.27■□□□□ 0.52
NEK9-204ENST00000554258 ATP2A3Q93084 1043 aa18.27■□□□□ 0.52
NEK9-204ENST00000554258 LPIN3Q9BQK8 851 aa18.27■□□□□ 0.52
NEK9-204ENST00000554258 OXCT2Q9BYC2 517 aaPredicted RBP18.27■□□□□ 0.52
NEK9-204ENST00000554258 IL21Q9HBE4 155 aa18.27■□□□□ 0.52
NEK9-204ENST00000554258 GPRC5CQ9NQ84 441 aa18.27■□□□□ 0.52
NEK9-204ENST00000554258 DUS2Q9NX74 493 aaKnown RBP18.27■□□□□ 0.52
NEK9-204ENST00000554258 KNL1Q8NG31 2342 aa18.27■□□□□ 0.51
NEK9-204ENST00000554258 A0A1W2PQD8 194 aa18.26■□□□□ 0.51
NEK9-204ENST00000554258 ANTXRLA6NF34 631 aa18.26■□□□□ 0.51
NEK9-204ENST00000554258 ACKR2O00590 384 aa18.26■□□□□ 0.51
NEK9-204ENST00000554258 ATXN1LP0C7T5 689 aaKnown RBP18.26■□□□□ 0.51
NEK9-204ENST00000554258 HLA-EP13747 358 aa18.26■□□□□ 0.51
NEK9-204ENST00000554258 DNM1Q05193 864 aaKnown RBP18.26■□□□□ 0.51
NEK9-204ENST00000554258 SLC39A14Q15043 492 aa18.26■□□□□ 0.51
NEK9-204ENST00000554258 TAF12Q16514 161 aa18.26■□□□□ 0.51
NEK9-204ENST00000554258 CALCRLQ16602 461 aa18.26■□□□□ 0.51
NEK9-204ENST00000554258 SLC36A4Q6YBV0 504 aa18.26■□□□□ 0.51
NEK9-204ENST00000554258 APBB1IPQ7Z5R6 666 aaPredicted RBP18.26■□□□□ 0.51
NEK9-204ENST00000554258 SLFN12Q8IYM2 578 aa18.26■□□□□ 0.51
NEK9-204ENST00000554258 TTC16Q8NEE8 873 aa18.26■□□□□ 0.51
NEK9-204ENST00000554258 TOR4AQ9NXH8 423 aa18.26■□□□□ 0.51
NEK9-204ENST00000554258 DNMT3LQ9UJW3 386 aa18.26■□□□□ 0.51
NEK9-204ENST00000554258 NOTCH2Q04721 2471 aa18.25■□□□□ 0.51
NEK9-204ENST00000554258 MTMR11A4FU01 709 aa18.25■□□□□ 0.51
NEK9-204ENST00000554258 OR6C75A6NL08 312 aa18.25■□□□□ 0.51
NEK9-204ENST00000554258 B8ZZF3 427 aa18.25■□□□□ 0.51
NEK9-204ENST00000554258 E9PAM4 449 aa18.25■□□□□ 0.51
NEK9-204ENST00000554258 ERVH48-1M5A8F1 160 aa18.25■□□□□ 0.51
NEK9-204ENST00000554258 USO1O60763 962 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms