RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 GPR62Q9BZJ7 368 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 UBE2OQ9C0C9 1292 aaKnown RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 DPEP3Q9H4B8 488 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 RC3H2Q9HBD1 1191 aaKnown RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 MRPL47Q9HD33 250 aaKnown RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 MARCH5Q9NX47 278 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 ADAM22Q9P0K1 906 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 HCSTQ9UBK5 93 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 STRIP2Q9ULQ0 834 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 GUCA1BQ9UMX6 200 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 SSX2IPQ9Y2D8 614 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 REXO2Q9Y3B8 237 aaKnown RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 BTNL10A8MVZ5 291 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 ATP2C2O75185 946 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 FAM200BP0CF97 657 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 CDH5P33151 784 aaPredicted RBP11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 ACADSBP45954 432 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 PLCB3Q01970 1234 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 CREMQ03060 361 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 MLLT1Q03111 559 aaPredicted RBP11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 CENPCQ03188 943 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 BST2Q10589 180 aaKnown RBP11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 DNTTIP2Q5QJE6 756 aaKnown RBP11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 PHF13Q86YI8 300 aaPredicted RBP11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 REXO1L1PQ8IX06 675 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 RHOT2Q8IXI1 618 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 MCOLN2Q8IZK6 566 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 C17orf53Q8N3J3 647 aaPredicted RBP11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 C1orf131Q8NDD1 294 aaKnown RBP11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 UBA3Q8TBC4 463 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 STK32AQ8WU08 396 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 SECISBP2LQ93073 1101 aaKnown RBP11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 ZNF653Q96CK0 615 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 ALS2CR12Q96Q35 445 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 ST7Q9NRC1 585 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 TAS2R14Q9NYV8 317 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 WDR35Q9P2L0 1181 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 MYO1AQ9UBC5 1043 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 GTF3C4Q9UKN8 822 aa11.07□□□□□ -0.64
TMEM55B-205ENST00000554028 TET1Q8NFU7 2136 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 A0A0A6YYK5 440 aaPredicted RBP11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 MACROD2A1Z1Q3 448 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 MYBPHLA2RUH7 354 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 USP27XA6NNY8 438 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 HCRTO43612 131 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 SOD2P04179 222 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 URODP06132 367 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 CFHP08603 1231 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 CCDC130P13994 396 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 CPB1P15086 417 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 MMP8P22894 467 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 GPD2P43304 727 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 MRPL58Q14197 206 aaKnown RBP11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 RASIP1Q5U651 963 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 FAM171BQ6P995 826 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 DDX53Q86TM3 631 aaKnown RBP11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 PALB2Q86YC2 1186 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 RIN2Q8WYP3 895 aaPredicted RBP11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 RFFLQ8WZ73 363 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 C18orf8Q96DM3 657 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 SMARCD1Q96GM5 515 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 ZSWIM1Q9BR11 485 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 C11orf70Q9BRQ4 267 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 HERC2P3Q9BVR0 1158 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 DUSP16Q9BY84 665 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 LACRTQ9GZZ8 138 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 ZCWPW1Q9H0M4 648 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 THAP2Q9H0W7 228 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 CRTAC1Q9NQ79 661 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 PARVAQ9NVD7 372 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 CTTNBP2NLQ9P2B4 639 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 CNOT8Q9UFF9 292 aaKnown RBP11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 NENFQ9UMX5 172 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 NME7Q9Y5B8 376 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 BACE2Q9Y5Z0 518 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 SCINQ9Y6U3 715 aa11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 PDCD11Q14690 1871 aaKnown RBP11.06□□□□□ -0.64
TMEM55B-205ENST00000554028 XPO1O14980 1071 aaKnown RBP11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 LPXNO60711 386 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 AP1G2O75843 785 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 FGF18O76093 207 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 NPR3P17342 541 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 DESP17661 470 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 CTNNB1P35222 781 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 TIE1P35590 1138 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 BMPR1AP36894 532 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 ARHGAP25P42331 645 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 GLUD2P49448 558 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 ARPP19P56211 112 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 GNG11P61952 73 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 TAP1Q03518 808 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 PDE4CQ08493 712 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 ZNF268Q14587 947 aaPredicted RBP11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 SHHQ15465 462 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 PSMD5Q16401 504 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 SLC39A12Q504Y0 691 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 MMS22LQ6ZRQ5 1243 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 MICAL3Q7RTP6 2002 aa11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 TMEM173Q86WV6 379 aaPredicted RBP11.05□□□□□ -0.64
TMEM55B-205ENST00000554028 GPR65Q8IYL9 337 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms