RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 DUSP4Q13115 394 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 KCNC3Q14003 757 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 TRIM14Q14142 442 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 GSE1Q14687 1217 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 CFAP221Q4G0U5 840 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 SGO2Q562F6 1265 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 PPP1R26Q5T8A7 1209 aaPredicted RBP13□□□□□ -0.33
SHMT2-209ENST00000553949 ARHGAP17Q68EM7 881 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 LLGL2Q6P1M3 1020 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 PAQR9Q6ZVX9 377 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 TMC6Q7Z403 805 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 SLC47A2Q86VL8 602 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 TCEAL8Q8IYN2 117 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 FUKQ8N0W3 1084 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 EFHBQ8N7U6 833 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 KREMEN2Q8NCW0 462 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 SPPL2BQ8TCT7 592 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 TFAP2BQ92481 460 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 FUBP3Q96I24 572 aaKnown RBP eCLIP13□□□□□ -0.33
SHMT2-209ENST00000553949 HNRNPABQ99729 332 aaKnown RBP13□□□□□ -0.33
SHMT2-209ENST00000553949 MED10Q9BTT4 135 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 RHOBTB2Q9BYZ6 727 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 ZNF518BQ9C0D4 1074 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 CRISPLD1Q9H336 500 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 CYP4F11Q9HBI6 524 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 MAN1C1Q9NR34 630 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 HSFX1Q9UBD0 423 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 SLC27A5Q9Y2P5 690 aa13□□□□□ -0.33
SHMT2-209ENST00000553949 ATP8B3O60423 1300 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 LRRC53A6NM62 1247 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 O00370 1275 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 PRRG1O14668 218 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 LINC01565O15544 149 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 NCK2O43639 380 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 HAPLN1P10915 354 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-209ENST00000553949 CYP11B1P15538 503 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 BDNFP23560 247 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 CYP2F1P24903 491 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 ADORA2BP29275 332 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 GNA15P30679 374 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 CASP14P31944 242 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 MRE11P49959 708 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 ZBED6P86452 979 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 TBX2Q13207 712 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-209ENST00000553949 MGAT5BQ3V5L5 792 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 LIN9Q5TKA1 542 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 ELMSAN1Q6PJG2 1045 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 TMEM184AQ6ZMB5 413 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 FAM35AQ86V20 835 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 GPIHBP1Q8IV16 184 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 TTC9BQ8N6N2 239 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 ZNF397Q8NF99 534 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-209ENST00000553949 HDAC7Q8WUI4 952 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 CASP10Q92851 521 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 SMARCD1Q96GM5 515 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 SEPT5Q99719 369 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-209ENST00000553949 ZSWIM1Q9BR11 485 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 PLEKHA4Q9H4M7 779 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 KRT82Q9NSB4 513 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 DPP7Q9UHL4 492 aa12.99□□□□□ -0.33
SHMT2-209ENST00000553949 LUC7L2Q9Y383 392 aaKnown RBP12.99□□□□□ -0.33
SHMT2-209ENST00000553949 THAP12O43422 761 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 MED7O43513 233 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 GLP2RO95838 553 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 C8AP07357 584 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 TPM1P09493 284 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 SRGAP2BP0DMP2 458 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 FERP16591 822 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 CDC25BP30305 580 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 MAGEA11P43364 429 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 TUFMP49411 452 aaKnown RBP12.98□□□□□ -0.33
SHMT2-209ENST00000553949 ARID5AQ03989 594 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 ADAM15Q13444 863 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 COL19A1Q14993 1142 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 STILQ15468 1287 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 CNGA2Q16280 664 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 ASIC2Q16515 512 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 GOLGA7BQ2TAP0 167 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 SFMBT2Q5VUG0 894 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 LCLAT1Q6UWP7 414 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 VSTM1Q6UX27 236 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 CCDC149Q6ZUS6 474 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 RTL10Q7L3V2 364 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 FMNL3Q8IVF7 1028 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 SLC7A14Q8TBB6 771 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 ZNF606Q8WXB4 792 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 NUCKS1Q9H1E3 243 aaKnown RBP12.98□□□□□ -0.33
SHMT2-209ENST00000553949 AIPL1Q9NZN9 384 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 TSPAN16Q9UKR8 245 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.98□□□□□ -0.33
SHMT2-209ENST00000553949 INSL5Q9Y5Q6 135 aa12.98□□□□□ -0.33
SHMT2-209ENST00000553949 MYO7AQ13402 2215 aa12.97□□□□□ -0.33
SHMT2-209ENST00000553949 ZMYND10O75800 440 aa12.97□□□□□ -0.33
SHMT2-209ENST00000553949 AP1G2O75843 785 aa12.97□□□□□ -0.33
SHMT2-209ENST00000553949 SOAT2O75908 522 aa12.97□□□□□ -0.33
SHMT2-209ENST00000553949 MICAL2O94851 1124 aa12.97□□□□□ -0.33
SHMT2-209ENST00000553949 CCDC172P0C7W6 258 aa12.97□□□□□ -0.33
SHMT2-209ENST00000553949 FAM200BP0CF97 657 aa12.97□□□□□ -0.33
SHMT2-209ENST00000553949 KRT9P35527 623 aa12.97□□□□□ -0.33
SHMT2-209ENST00000553949 GRIK1P39086 918 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms