RNA–Protein interactions for RNA: ENST00000553866.1

CHGA-203, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 889 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-203ENST00000553866 ECI2O75521 394 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 TADA3O75528 432 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 ASS1P00966 412 aaKnown RBP13.46□□□□□ -0.25
CHGA-203ENST00000553866 F11P03951 625 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 FAM163BP0C2L3 166 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 KRT13P13646 458 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 BDNFP23560 247 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 CCNE1P24864 410 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 AVPR2P30518 371 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 PIK3CAP42336 1068 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 CYP27A1Q02318 531 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 GRM2Q14416 872 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 VEPH1Q14D04 833 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 SGSM1Q2NKQ1 1148 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 CFAP221Q4G0U5 840 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 KLHL10Q6JEL2 608 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 VITQ6UXI7 678 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 ITIH5Q86UX2 942 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 SCN4BQ8IWT1 228 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 TMEM105Q8N8V8 129 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 LEMD2Q8NC56 503 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 MYCBPAPQ8TBZ2 947 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 B3GNT5Q9BYG0 378 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 ATXN3LQ9H3M9 355 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 ABCB6Q9NP58 842 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 SLC2A4RGQ9NR83 387 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 WNT16Q9UBV4 365 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 HOOK1Q9UJC3 728 aaKnown RBP13.46□□□□□ -0.25
CHGA-203ENST00000553866 FBXL21Q9UKT6 434 aa13.46□□□□□ -0.25
CHGA-203ENST00000553866 MAGED2Q9UNF1 606 aaPredicted RBP13.46□□□□□ -0.25
CHGA-203ENST00000553866 A8MXQ7 604 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 PRAMEF12O95522 483 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 ASPAP45381 313 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 USP46P62068 366 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 CBWD6Q4V339 395 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 CBWD3Q5JTY5 395 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 CBWD5Q5RIA9 395 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 GPR158Q5T848 1215 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 TTI2Q6NXR4 508 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 PAQR9Q6ZVX9 377 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 FLCNQ8NFG4 579 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 SMARCD2Q92925 531 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 ELSPBP1Q96BH3 223 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 FUBP3Q96I24 572 aaKnown RBP eCLIP13.45□□□□□ -0.26
CHGA-203ENST00000553866 SLC46A2Q9BY10 475 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 ZNF518BQ9C0D4 1074 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 SMG9Q9H0W8 520 aaKnown RBP13.45□□□□□ -0.26
CHGA-203ENST00000553866 SLITRK6Q9H5Y7 841 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 TMEM8AQ9HCN3 771 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 MAGEC2Q9UBF1 373 aaPredicted RBP13.45□□□□□ -0.26
CHGA-203ENST00000553866 CTNND2Q9UQB3 1225 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 ZDBF2Q9HCK1 2354 aa13.45□□□□□ -0.26
CHGA-203ENST00000553866 COL4A2P08572 1712 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 NUP210Q8TEM1 1887 aaPredicted RBP13.44□□□□□ -0.26
CHGA-203ENST00000553866 SHISA7A6NL88 538 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 NOL4O94818 638 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 CLSTN1O94985 981 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 EPB41P11171 864 aaKnown RBP13.44□□□□□ -0.26
CHGA-203ENST00000553866 MAGEA11P43364 429 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 NDST1P52848 882 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 STX17P56962 302 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 NLRP12P59046 1061 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 RPL10AP62906 217 aaKnown RBP13.44□□□□□ -0.26
CHGA-203ENST00000553866 FKBP3Q00688 224 aaKnown RBP13.44□□□□□ -0.26
CHGA-203ENST00000553866 ENPEPQ07075 957 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 CLEC17AQ6ZS10 378 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 ACOT1Q86TX2 421 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 ARID3BQ8IVW6 561 aaPredicted RBP13.44□□□□□ -0.26
CHGA-203ENST00000553866 SUGP1Q8IWZ8 645 aaKnown RBP13.44□□□□□ -0.26
CHGA-203ENST00000553866 B3GALNT2Q8NCR0 500 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 PRSS33Q8NF86 280 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 NELFBQ8WX92 580 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 DHTKD1Q96HY7 919 aaPredicted RBP13.44□□□□□ -0.26
CHGA-203ENST00000553866 MED15Q96RN5 788 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 TWNKQ96RR1 684 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 TSG101Q99816 390 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 BCO2Q9BYV7 579 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 TRPV4Q9HBA0 871 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 ZFP14Q9HCL3 533 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 KIAA1468Q9P260 1216 aa13.44□□□□□ -0.26
CHGA-203ENST00000553866 ANAPC1Q9H1A4 1944 aa13.43□□□□□ -0.26
CHGA-203ENST00000553866 HEPACAM2A8MVW5 462 aa13.43□□□□□ -0.26
CHGA-203ENST00000553866 F8VP50 259 aa13.43□□□□□ -0.26
CHGA-203ENST00000553866 PSMA7O14818 248 aa13.43□□□□□ -0.26
CHGA-203ENST00000553866 SLC16A3O15427 465 aaKnown RBP13.43□□□□□ -0.26
CHGA-203ENST00000553866 CSH1P0DML2 217 aa13.43□□□□□ -0.26
CHGA-203ENST00000553866 CSH2P0DML3 217 aa13.43□□□□□ -0.26
CHGA-203ENST00000553866 GRIK1P39086 918 aa13.43□□□□□ -0.26
CHGA-203ENST00000553866 NOP14P78316 857 aaKnown RBP13.43□□□□□ -0.26
CHGA-203ENST00000553866 LRRC63Q05C16 580 aa13.43□□□□□ -0.26
CHGA-203ENST00000553866 TAF12Q16514 161 aa13.43□□□□□ -0.26
CHGA-203ENST00000553866 DCAF17Q5H9S7 520 aaPredicted RBP13.43□□□□□ -0.26
CHGA-203ENST00000553866 TCERG1LQ5VWI1 586 aa13.43□□□□□ -0.26
CHGA-203ENST00000553866 KRT39Q6A163 491 aa13.43□□□□□ -0.26
CHGA-203ENST00000553866 TXNDC8Q6A555 127 aa13.43□□□□□ -0.26
CHGA-203ENST00000553866 ASTLQ6HA08 431 aaPredicted RBP13.43□□□□□ -0.26
CHGA-203ENST00000553866 C4orf50Q6ZRC1 276 aa13.43□□□□□ -0.26
CHGA-203ENST00000553866 RIN3Q8TB24 985 aa13.43□□□□□ -0.26
CHGA-203ENST00000553866 WHAMMQ8TF30 809 aa13.43□□□□□ -0.26
CHGA-203ENST00000553866 TAF4BQ92750 862 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms