RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 MRPS18AQ9NVS2 196 aaKnown RBP4.14□□□□□ -1.75
VRK1-202ENST00000553683 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.14□□□□□ -1.75
VRK1-202ENST00000553683 CPA4Q9UI42 421 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 KAT6AQ92794 2004 aa4.14□□□□□ -1.75
VRK1-202ENST00000553683 TBC1D4O60343 1298 aa4.13□□□□□ -1.75
VRK1-202ENST00000553683 TTLL1O95922 423 aa4.13□□□□□ -1.75
VRK1-202ENST00000553683 IGLV2-14P01704 120 aa4.13□□□□□ -1.75
VRK1-202ENST00000553683 ZFXP17010 805 aaPredicted RBP4.13□□□□□ -1.75
VRK1-202ENST00000553683 ALDH9A1P49189 494 aa4.13□□□□□ -1.75
VRK1-202ENST00000553683 ZNF134P52741 427 aa4.13□□□□□ -1.75
VRK1-202ENST00000553683 UCP3P55916 312 aa4.13□□□□□ -1.75
VRK1-202ENST00000553683 FAM193AP78312 1265 aa4.13□□□□□ -1.75
VRK1-202ENST00000553683 POLD3Q15054 466 aaPredicted RBP4.13□□□□□ -1.75
VRK1-202ENST00000553683 LRRC41Q15345 812 aa4.13□□□□□ -1.75
VRK1-202ENST00000553683 MGAT5BQ3V5L5 792 aa4.13□□□□□ -1.75
VRK1-202ENST00000553683 TSHZ1Q6ZSZ6 1077 aa4.13□□□□□ -1.75
VRK1-202ENST00000553683 RD3Q7Z3Z2 195 aa4.13□□□□□ -1.75
VRK1-202ENST00000553683 BOLLQ8N9W6 283 aaKnown RBP4.13□□□□□ -1.75
VRK1-202ENST00000553683 C22orf23Q9BZE7 217 aa4.13□□□□□ -1.75
VRK1-202ENST00000553683 R3HDMLQ9H3Y0 253 aa4.13□□□□□ -1.75
VRK1-202ENST00000553683 PRDM13Q9H4Q3 707 aa4.13□□□□□ -1.75
VRK1-202ENST00000553683 A1CFQ9NQ94 594 aaKnown RBP4.13□□□□□ -1.75
VRK1-202ENST00000553683 ZSCAN32Q9NX65 697 aa4.13□□□□□ -1.75
VRK1-202ENST00000553683 PTGFRNQ9P2B2 879 aa4.13□□□□□ -1.75
VRK1-202ENST00000553683 ARPP21Q9UBL0 812 aaPredicted RBP4.13□□□□□ -1.75
VRK1-202ENST00000553683 TPCN1Q9ULQ1 816 aa4.13□□□□□ -1.75
VRK1-202ENST00000553683 NOB1Q9ULX3 412 aaKnown RBP4.13□□□□□ -1.75
VRK1-202ENST00000553683 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.13□□□□□ -1.75
VRK1-202ENST00000553683 MBD3L4A6NDZ8 208 aaPredicted RBP4.12□□□□□ -1.75
VRK1-202ENST00000553683 MBD3L3A6NE82 208 aaPredicted RBP4.12□□□□□ -1.75
VRK1-202ENST00000553683 VWC2LB2RUY7 222 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 GOLIM4O00461 696 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 PRPF3O43395 683 aaKnown RBP4.12□□□□□ -1.75
VRK1-202ENST00000553683 C1QL1O75973 258 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 TJP3O95049 919 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 CHRM2P08172 466 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 GPD1P21695 349 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 ITPKBP27987 946 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 PLA2G5P39877 138 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 DGKEP52429 567 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 SLC13A2Q13183 592 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 HLTFQ14527 1009 aaKnown RBP eCLIP4.12□□□□□ -1.75
VRK1-202ENST00000553683 CNN3Q15417 329 aaKnown RBP4.12□□□□□ -1.75
VRK1-202ENST00000553683 TBCCQ15814 346 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 FAM153CQ494X1 144 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 VPS53Q5VIR6 699 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 DPY19L2P1Q6NXN4 242 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 PTF1AQ7RTS3 328 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 ZNF804AQ7Z570 1209 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 DNAJC5GQ8N7S2 189 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 PCSK9Q8NBP7 692 aaKnown RBP4.12□□□□□ -1.75
VRK1-202ENST00000553683 RP9Q8TA86 221 aaKnown RBP4.12□□□□□ -1.75
VRK1-202ENST00000553683 TBC1D5Q92609 795 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 RSPRY1Q96DX4 576 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 APIPQ96GX9 242 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 MSLNLQ96KJ4 702 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 P2RX7Q99572 595 aaKnown RBP4.12□□□□□ -1.75
VRK1-202ENST00000553683 TTYH3Q9C0H2 523 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 LRRC27Q9C0I9 530 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 SMURF2Q9HAU4 748 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 NDRG4Q9ULP0 352 aaKnown RBP4.12□□□□□ -1.75
VRK1-202ENST00000553683 SSX2IPQ9Y2D8 614 aa4.12□□□□□ -1.75
VRK1-202ENST00000553683 TRIM43BA6NCK2 446 aa4.11□□□□□ -1.75
VRK1-202ENST00000553683 LINC00473A8K010 186 aa4.11□□□□□ -1.75
VRK1-202ENST00000553683 FOXN3O00409 490 aaPredicted RBP4.11□□□□□ -1.75
VRK1-202ENST00000553683 MGST3O14880 152 aa4.11□□□□□ -1.75
VRK1-202ENST00000553683 CCP110O43303 1012 aa4.11□□□□□ -1.75
VRK1-202ENST00000553683 CHRM3P20309 590 aa4.11□□□□□ -1.75
VRK1-202ENST00000553683 SLC7A1P30825 629 aa4.11□□□□□ -1.75
VRK1-202ENST00000553683 PDE6CP51160 858 aa4.11□□□□□ -1.75
VRK1-202ENST00000553683 ATXN1P54253 815 aaKnown RBP4.11□□□□□ -1.75
VRK1-202ENST00000553683 LILRA4P59901 499 aa4.11□□□□□ -1.75
VRK1-202ENST00000553683 CTBP1Q13363 440 aa4.11□□□□□ -1.75
VRK1-202ENST00000553683 AARS2Q5JTZ9 985 aaKnown RBP4.11□□□□□ -1.75
VRK1-202ENST00000553683 DARS2Q6PI48 645 aaKnown RBP4.11□□□□□ -1.75
VRK1-202ENST00000553683 APOA5Q6Q788 366 aa4.11□□□□□ -1.75
VRK1-202ENST00000553683 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.11□□□□□ -1.75
VRK1-202ENST00000553683 CELF5Q8N6W0 485 aaKnown RBP4.11□□□□□ -1.75
VRK1-202ENST00000553683 TTC8Q8TAM2 541 aa4.11□□□□□ -1.75
VRK1-202ENST00000553683 LRTOMTQ8WZ04 291 aa4.11□□□□□ -1.75
VRK1-202ENST00000553683 TRIM43Q96BQ3 446 aaPredicted RBP4.11□□□□□ -1.75
VRK1-202ENST00000553683 HAPLN3Q96S86 360 aa4.11□□□□□ -1.75
VRK1-202ENST00000553683 KLK15Q9H2R5 256 aa4.11□□□□□ -1.75
VRK1-202ENST00000553683 DHX36Q9H2U1 1008 aaKnown RBP4.11□□□□□ -1.75
VRK1-202ENST00000553683 ARHGEF3Q9NR81 526 aa4.11□□□□□ -1.75
VRK1-202ENST00000553683 STAP2Q9UGK3 403 aa4.11□□□□□ -1.75
VRK1-202ENST00000553683 G3BP2Q9UN86 482 aaKnown RBP4.11□□□□□ -1.75
VRK1-202ENST00000553683 CFAP69A5D8W1 941 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 TBX3O15119 743 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 PPM1DO15297 605 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 PPM1GO15355 546 aaPredicted RBP4.1□□□□□ -1.75
VRK1-202ENST00000553683 PRKCBP05771 671 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 RHOP08100 348 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 ELFN1P0C7U0 828 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 NR2F6P10588 404 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 KITP10721 976 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 MYF5P13349 255 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 KLRC1P26715 233 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 PCSK6P29122 969 aa4.1□□□□□ -1.75
VRK1-202ENST00000553683 CCT8P50990 548 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms