RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 NEK11Q8NG66 645 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 TMEM174Q8WUU8 243 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 NELL1Q92832 810 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 C18orf25Q96B23 403 aaPredicted RBP17.16■□□□□ 0.34
ACTN1-209ENST00000553659 TCEAL4Q96EI5 215 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 SUSD3Q96L08 255 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 NTPCRQ9BSD7 190 aaKnown RBP17.16■□□□□ 0.34
ACTN1-209ENST00000553659 ST6GALNAC4Q9H4F1 302 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 DLL3Q9NYJ7 618 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 ARMCX3Q9UH62 379 aaPredicted RBP17.16■□□□□ 0.34
ACTN1-209ENST00000553659 MAFFQ9ULX9 164 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 SIK3Q9Y2K2 1263 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 DAAM1Q9Y4D1 1078 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 INSL5Q9Y5Q6 135 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 ADGRG1Q9Y653 693 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 SOWAHDA6NJG2 315 aa17.15■□□□□ 0.34
ACTN1-209ENST00000553659 SHISA7A6NL88 538 aa17.15■□□□□ 0.34
ACTN1-209ENST00000553659 LILRB5O75023 590 aa17.15■□□□□ 0.34
ACTN1-209ENST00000553659 NR3C1P04150 777 aa17.15■□□□□ 0.34
ACTN1-209ENST00000553659 FCARP24071 287 aa17.15■□□□□ 0.34
ACTN1-209ENST00000553659 MAPK7Q13164 816 aa17.15■□□□□ 0.34
ACTN1-209ENST00000553659 FAM78AQ5JUQ0 283 aa17.15■□□□□ 0.34
ACTN1-209ENST00000553659 CYP4A22Q5TCH4 519 aa17.15■□□□□ 0.34
ACTN1-209ENST00000553659 TOGARAM2Q6ZUX3 1019 aa17.15■□□□□ 0.34
ACTN1-209ENST00000553659 PDZD4Q76G19 769 aaPredicted RBP17.15■□□□□ 0.34
ACTN1-209ENST00000553659 ELMOD1Q8N336 334 aa17.15■□□□□ 0.34
ACTN1-209ENST00000553659 ZNF592Q92610 1267 aa17.15■□□□□ 0.34
ACTN1-209ENST00000553659 HVCN1Q96D96 273 aa17.15■□□□□ 0.34
ACTN1-209ENST00000553659 ZBTB45Q96K62 511 aaPredicted RBP17.15■□□□□ 0.34
ACTN1-209ENST00000553659 TRMT61BQ9BVS5 477 aaKnown RBP17.15■□□□□ 0.34
ACTN1-209ENST00000553659 FGFBP2Q9BYJ0 223 aa17.15■□□□□ 0.34
ACTN1-209ENST00000553659 BRD9Q9H8M2 597 aa17.15■□□□□ 0.34
ACTN1-209ENST00000553659 NCDNQ9UBB6 729 aa17.15■□□□□ 0.34
ACTN1-209ENST00000553659 MYO1AQ9UBC5 1043 aa17.15■□□□□ 0.34
ACTN1-209ENST00000553659 COL4A2P08572 1712 aa17.15■□□□□ 0.34
ACTN1-209ENST00000553659 F5P12259 2224 aa17.15■□□□□ 0.34
ACTN1-209ENST00000553659 CACNA1AO00555 2505 aa17.14■□□□□ 0.33
ACTN1-209ENST00000553659 MED19A0JLT2 244 aaPredicted RBP17.14■□□□□ 0.33
ACTN1-209ENST00000553659 SFI1A8K8P3 1242 aa17.14■□□□□ 0.33
ACTN1-209ENST00000553659 MAN2B1O00754 1011 aa17.14■□□□□ 0.33
ACTN1-209ENST00000553659 SLC16A4O15374 487 aa17.14■□□□□ 0.33
ACTN1-209ENST00000553659 MEFVO15553 781 aaPredicted RBP17.14■□□□□ 0.33
ACTN1-209ENST00000553659 PRPF6O94906 941 aaKnown RBP17.14■□□□□ 0.33
ACTN1-209ENST00000553659 PLS3P13797 630 aa17.14■□□□□ 0.33
ACTN1-209ENST00000553659 CCR2P41597 374 aa17.14■□□□□ 0.33
ACTN1-209ENST00000553659 CASP5P51878 434 aa17.14■□□□□ 0.33
ACTN1-209ENST00000553659 GRM2Q14416 872 aa17.14■□□□□ 0.33
ACTN1-209ENST00000553659 SLC10A6Q3KNW5 377 aa17.14■□□□□ 0.33
ACTN1-209ENST00000553659 IQCEQ6IPM2 695 aa17.14■□□□□ 0.33
ACTN1-209ENST00000553659 ZNF280DQ6N043 979 aa17.14■□□□□ 0.33
ACTN1-209ENST00000553659 RAD9BQ6WBX8 426 aa17.14■□□□□ 0.33
ACTN1-209ENST00000553659 ZNF662Q6ZS27 426 aa17.14■□□□□ 0.33
ACTN1-209ENST00000553659 SLC9A9Q8IVB4 645 aa17.14■□□□□ 0.33
ACTN1-209ENST00000553659 GPR161Q8N6U8 529 aaKnown RBP17.14■□□□□ 0.33
ACTN1-209ENST00000553659 APPL2Q8NEU8 664 aa17.14■□□□□ 0.33
ACTN1-209ENST00000553659 ZNF512Q96ME7 567 aaPredicted RBP17.14■□□□□ 0.33
ACTN1-209ENST00000553659 ASB16Q96NS5 453 aa17.14■□□□□ 0.33
ACTN1-209ENST00000553659 PRMT8Q9NR22 394 aaPredicted RBP17.14■□□□□ 0.33
ACTN1-209ENST00000553659 AFF4Q9UHB7 1163 aaKnown RBP17.14■□□□□ 0.33
ACTN1-209ENST00000553659 DMXL1Q9Y485 3027 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 H0YCG3 227 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 RIOK3O14730 519 aaKnown RBP17.13■□□□□ 0.33
ACTN1-209ENST00000553659 KIF5CO60282 957 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 TOM1L1O75674 476 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 AFPP02771 609 aaKnown RBP17.13■□□□□ 0.33
ACTN1-209ENST00000553659 HARSP12081 509 aaKnown RBP17.13■□□□□ 0.33
ACTN1-209ENST00000553659 PSMC3P17980 439 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 PSMC2P35998 433 aaKnown RBP17.13■□□□□ 0.33
ACTN1-209ENST00000553659 STRN3Q13033 797 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 MTAPQ13126 283 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 TUBB2AQ13885 445 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 TSSK4Q6SA08 328 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 MAMSTRQ6ZN01 415 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 MAP4K3Q8IVH8 894 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 HS6ST3Q8IZP7 471 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 ZNF687Q8N1G0 1237 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 LEMD2Q8NC56 503 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 SPIRE2Q8WWL2 714 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 SYN2Q92777 582 aaPredicted RBP17.13■□□□□ 0.33
ACTN1-209ENST00000553659 SMARCD2Q92925 531 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 IRF7Q92985 503 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 SECISBP2LQ93073 1101 aaKnown RBP17.13■□□□□ 0.33
ACTN1-209ENST00000553659 ZSWIM3Q96MP5 696 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 TUBB2BQ9BVA1 445 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 FAM126AQ9BYI3 521 aaPredicted RBP17.13■□□□□ 0.33
ACTN1-209ENST00000553659 EPC1Q9H2F5 836 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 MMRN2Q9H8L6 949 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 ZNF334Q9HCZ1 680 aaPredicted RBP17.13■□□□□ 0.33
ACTN1-209ENST00000553659 TRPV5Q9NQA5 729 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 CEP72Q9P209 647 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 PCDHB8Q9UN66 801 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 EXOC7Q9UPT5 735 aa17.13■□□□□ 0.33
ACTN1-209ENST00000553659 EPN1Q9Y6I3 576 aaPredicted RBP17.13■□□□□ 0.33
ACTN1-209ENST00000553659 ANK1P16157 1881 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 GTPBP10A4D1E9 387 aaKnown RBP17.12■□□□□ 0.33
ACTN1-209ENST00000553659 NRG2O14511 850 aaPredicted RBP17.12■□□□□ 0.33
ACTN1-209ENST00000553659 MOSPD3O75425 235 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 PPP1R37O75864 691 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 NDUFA10O95299 355 aa17.12■□□□□ 0.33
ACTN1-209ENST00000553659 SMTNP53814 917 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms