RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 GCNT4Q9P109 453 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 EPS15L1Q9UBC2 864 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 CDH7Q9ULB5 785 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 TTC28Q96AY4 2481 aa10.92□□□□□ -0.66
TRAFD1-208ENST00000552890 C19orf67A6NJJ6 358 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 LOC730098B7Z3J9 87 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 CCL16O15467 120 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 RFPL2O75678 378 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 RHOP08100 348 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 FAM200BP0CF97 657 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 WEE1P30291 646 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 GBP2P32456 591 aaPredicted RBP10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 NDST1P52848 882 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 ZP2Q05996 745 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 TADA2BQ86TJ2 420 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 UBALD2Q8IYN6 164 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 KIAA1958Q8N8K9 716 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 STKLD1Q8NE28 680 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 MRPS31Q92665 395 aaKnown RBP10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 ZNF707Q96C28 371 aaPredicted RBP10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 HEXIM2Q96MH2 286 aaKnown RBP10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 PGLYRP2Q96PD5 576 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 SLITRK1Q96PX8 696 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 CDK5RAP1Q96SZ6 601 aaKnown RBP10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 HNRNPABQ99729 332 aaKnown RBP10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 RTP3Q9BQQ7 232 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 CORO1BQ9BR76 489 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 SMYD3Q9H7B4 428 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 APEX2Q9UBZ4 518 aa10.91□□□□□ -0.66
TRAFD1-208ENST00000552890 WEE2P0C1S8 567 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 VDRP11473 427 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 IGFBP6P24592 240 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 LMO2P25791 158 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 PSEN1P49768 467 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 KCNQ1P51787 676 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 ANO6Q4KMQ2 910 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 SGO2Q562F6 1265 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 MDH1BQ5I0G3 518 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 CDKAL1Q5VV42 579 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 SCARA5Q6ZMJ2 495 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 DENND5BQ6ZUT9 1274 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 GRASPQ7Z6J2 395 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 DNAJB7Q7Z6W7 309 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 ARHGAP18Q8N392 663 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 C12orf76Q8N812 135 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 MYLPFQ96A32 169 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 EXOC4Q96A65 974 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 CYFIP2Q96F07 1278 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 PCED1BQ96HM7 432 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 RPGRIP1Q96KN7 1286 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 MYRFLQ96LU7 910 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 PKMYT1Q99640 499 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 MRPL45Q9BRJ2 306 aaKnown RBP10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 TRIM62Q9BVG3 475 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 MIS12Q9H081 205 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 INTS2Q9H0H0 1204 aaKnown RBP10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 DNAJC25Q9H1X3 360 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 POMKQ9H5K3 350 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 PLCB1Q9NQ66 1216 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 PRDM6Q9NQX0 595 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 TRPM5Q9NZQ8 1165 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 CEP83Q9Y592 693 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 COL6A3P12111 3177 aa10.9□□□□□ -0.66
TRAFD1-208ENST00000552890 ATG2AQ2TAZ0 1938 aa10.9□□□□□ -0.67
TRAFD1-208ENST00000552890 NCANO14594 1321 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 MYBPHLA2RUH7 354 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 SART1O43290 800 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 SEC24AO95486 1093 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 OR4Q2P0C623 313 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 SETSIPP0DME0 302 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 LAMP2P13473 410 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 CD58P19256 250 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 BDNFP23560 247 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 ACAT1P24752 427 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 BCAT1P54687 386 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 CDH8P55286 799 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 PFKPQ01813 784 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 ARHGAP17Q68EM7 881 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 C1orf228Q6PIY5 440 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 TRIM65Q6PJ69 517 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 ACOT1Q86TX2 421 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 LRRTM3Q86VH5 581 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 IRF2BP1Q8IU81 584 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 SCN4BQ8IWT1 228 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 NUP93Q8N1F7 819 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 SEMA4DQ92854 862 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 NOX5Q96PH1 765 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 PI4K2AQ9BTU6 479 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 SLITRK6Q9H5Y7 841 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 KIF9Q9HAQ2 790 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 APOBEC3GQ9HC16 384 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 FANCLQ9NW38 375 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 OBP2AQ9NY56 170 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 LIMA1Q9UHB6 759 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 SORCS3Q9UPU3 1222 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 SLC27A5Q9Y2P5 690 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 PCDHB4Q9Y5E5 795 aa10.89□□□□□ -0.67
TRAFD1-208ENST00000552890 CUL9Q8IWT3 2517 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 SYCE3A1L190 88 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 RBAK-RBAKDNI3L0D1 243 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms