RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 TMEM209Q96SK2 561 aa6.32□□□□□ -1.4
CCDC65-204ENST00000552188 ACBD6Q9BR61 282 aa6.32□□□□□ -1.4
CCDC65-204ENST00000552188 LRFN3Q9BTN0 628 aa6.32□□□□□ -1.4
CCDC65-204ENST00000552188 PI4K2AQ9BTU6 479 aa6.32□□□□□ -1.4
CCDC65-204ENST00000552188 ZCWPW1Q9H0M4 648 aa6.32□□□□□ -1.4
CCDC65-204ENST00000552188 SLITRK6Q9H5Y7 841 aa6.32□□□□□ -1.4
CCDC65-204ENST00000552188 KCNK12Q9HB15 430 aa6.32□□□□□ -1.4
CCDC65-204ENST00000552188 GDAP2Q9NXN4 497 aa6.32□□□□□ -1.4
CCDC65-204ENST00000552188 MAGEC2Q9UBF1 373 aaPredicted RBP6.32□□□□□ -1.4
CCDC65-204ENST00000552188 SIX4Q9UIU6 781 aa6.32□□□□□ -1.4
CCDC65-204ENST00000552188 CDH7Q9ULB5 785 aa6.32□□□□□ -1.4
CCDC65-204ENST00000552188 L1RE1Q9UN81 338 aa6.32□□□□□ -1.4
CCDC65-204ENST00000552188 TRAF3IP3Q9Y228 551 aa6.32□□□□□ -1.4
CCDC65-204ENST00000552188 ASB3Q9Y575 518 aa6.32□□□□□ -1.4
CCDC65-204ENST00000552188 PCDHA5Q9Y5H7 936 aa6.32□□□□□ -1.4
CCDC65-204ENST00000552188 TICRRQ7Z2Z1 1910 aa6.32□□□□□ -1.4
CCDC65-204ENST00000552188 MYO16Q9Y6X6 1858 aa6.32□□□□□ -1.4
CCDC65-204ENST00000552188 ATP8B3O60423 1300 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 PTPRJQ12913 1337 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 HELZP42694 1942 aaKnown RBP6.31□□□□□ -1.4
CCDC65-204ENST00000552188 ANAPC1Q9H1A4 1944 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 LRRIQ3A6PVS8 624 aaPredicted RBP6.31□□□□□ -1.4
CCDC65-204ENST00000552188 A8MXQ7 604 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 RNF223E7ERA6 249 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 BIN1O00499 593 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 MAPK13O15264 365 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 CST3P01034 146 aaPredicted RBP6.31□□□□□ -1.4
CCDC65-204ENST00000552188 PDGFRBP09619 1106 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 ACAT1P24752 427 aaKnown RBP6.31□□□□□ -1.4
CCDC65-204ENST00000552188 ANXA13P27216 316 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 GABRR2P28476 465 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 GNL1P36915 607 aaPredicted RBP6.31□□□□□ -1.4
CCDC65-204ENST00000552188 PRCPP42785 496 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 MYL6P60660 151 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 NCOA4Q13772 614 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 MAPRE1Q15691 268 aaKnown RBP6.31□□□□□ -1.4
CCDC65-204ENST00000552188 NFIL3Q16649 462 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 TPD52L1Q16890 204 aaPredicted RBP6.31□□□□□ -1.4
CCDC65-204ENST00000552188 SGSM1Q2NKQ1 1148 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 EDRF1Q3B7T1 1238 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 INTS6LQ5JSJ4 861 aaKnown RBP6.31□□□□□ -1.4
CCDC65-204ENST00000552188 KLHL10Q6JEL2 608 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 SCARA5Q6ZMJ2 495 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 DNAJB7Q7Z6W7 309 aaPredicted RBP6.31□□□□□ -1.4
CCDC65-204ENST00000552188 SCN4BQ8IWT1 228 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 YAF2Q8IY57 180 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 FLCNQ8NFG4 579 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 OR10T2Q8NGX3 314 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 RSAD2Q8WXG1 361 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 ERCC4Q92889 916 aaPredicted RBP6.31□□□□□ -1.4
CCDC65-204ENST00000552188 GBP4Q96PP9 640 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 SYT15Q9BQS2 421 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 MED10Q9BTT4 135 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 GPR88Q9GZN0 384 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 ATXN3LQ9H3M9 355 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 DMAC2Q9NW81 257 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 GDE1Q9NZC3 331 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 EPS15L1Q9UBC2 864 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 HSFX1Q9UBD0 423 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 GTF3C4Q9UKN8 822 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 CDH9Q9ULB4 789 aa6.31□□□□□ -1.4
CCDC65-204ENST00000552188 MAGED2Q9UNF1 606 aaPredicted RBP6.31□□□□□ -1.4
CCDC65-204ENST00000552188 FCF1Q9Y324 198 aaKnown RBP6.31□□□□□ -1.4
CCDC65-204ENST00000552188 C5orf42Q9H799 3197 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 NCOR1O75376 2440 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 KMT2EQ8IZD2 1858 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 A0A1W2PRU2 124 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 BICDL2A1A5D9 508 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 IKBKBO14920 756 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 N4BP1O75113 896 aaKnown RBP6.3□□□□□ -1.4
CCDC65-204ENST00000552188 TACC1O75410 805 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 SOAT2O75908 522 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 PAPLNO95428 1278 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 FGFR1OPO95684 399 aaKnown RBP6.3□□□□□ -1.4
CCDC65-204ENST00000552188 STAU1O95793 577 aaKnown RBP6.3□□□□□ -1.4
CCDC65-204ENST00000552188 C4BPAP04003 597 aaKnown RBP6.3□□□□□ -1.4
CCDC65-204ENST00000552188 FAM163BP0C2L3 166 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 TRIM49P0CI25 452 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 TRIM49CP0CI26 452 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 CSH1P0DML2 217 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 CSH2P0DML3 217 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 HAPLN1P10915 354 aaPredicted RBP6.3□□□□□ -1.4
CCDC65-204ENST00000552188 GJA1P17302 382 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 CEBPBP17676 345 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 WARSP23381 471 aaKnown RBP6.3□□□□□ -1.4
CCDC65-204ENST00000552188 CCNE1P24864 410 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 CDC25CP30307 473 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 CTHP32929 405 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 GRIK1P39086 918 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 GCLMP48507 274 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 MMP16P51512 607 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 PSMC1P62191 440 aaKnown RBP6.3□□□□□ -1.4
CCDC65-204ENST00000552188 DLG4P78352 724 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 FKBP3Q00688 224 aaKnown RBP6.3□□□□□ -1.4
CCDC65-204ENST00000552188 LRRC63Q05C16 580 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 CAMK4Q16566 473 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 SOWAHAQ2M3V2 549 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 CCDC40Q4G0X9 1142 aa6.3□□□□□ -1.4
CCDC65-204ENST00000552188 DCAF17Q5H9S7 520 aaPredicted RBP6.3□□□□□ -1.4
CCDC65-204ENST00000552188 MDH1BQ5I0G3 518 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms