RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SLC9A4Q6AI14 798 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 CCDC91Q7Z6B0 441 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 RNF180Q86T96 592 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 CCAR2Q8N163 923 aaKnown RBP5.22□□□□□ -1.57
SCAF11-212ENST00000549162 ZNF687Q8N1G0 1237 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 GRIN3AQ8TCU5 1115 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 MAML1Q92585 1016 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 NKD2Q969F2 451 aaPredicted RBP5.22□□□□□ -1.57
SCAF11-212ENST00000549162 ZIM3Q96PE6 472 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 CYP2S1Q96SQ9 504 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 PRMT1Q99873 361 aaKnown RBP5.22□□□□□ -1.57
SCAF11-212ENST00000549162 RTP3Q9BQQ7 232 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 SPON2Q9BUD6 331 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 LRRC19Q9H756 370 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 EVA1BQ9NVM1 165 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 DNAI1Q9UI46 699 aa5.22□□□□□ -1.57
SCAF11-212ENST00000549162 DDX49Q9Y6V7 483 aaKnown RBP5.22□□□□□ -1.57
SCAF11-212ENST00000549162 POTEMA6NI47 508 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 HACD1B0YJ81 288 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 TOR1BO14657 336 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 ABHD2P08910 425 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 HNRNPA1P09651 372 aaKnown RBP eCLIP5.21□□□□□ -1.57
SCAF11-212ENST00000549162 IQCF3P0C7M6 154 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 CCNYL3P0C7X3 344 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 HOXA6P31267 233 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 IRS1P35568 1242 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 EIF2DP41214 584 aaKnown RBP5.21□□□□□ -1.57
SCAF11-212ENST00000549162 NBPF20Q3BBV1 942 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 SLC10A6Q3KNW5 377 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 TBCELQ5QJ74 424 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 ACAD10Q6JQN1 1059 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 MFSD5Q6N075 450 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 METTL2BQ6P1Q9 378 aaKnown RBP5.21□□□□□ -1.57
SCAF11-212ENST00000549162 Q6ZNB5 142 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 RSPH3Q86UC2 560 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 TDRPQ86YL5 185 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 OLFM3Q96PB7 478 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 NDNQ99608 321 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 VEZTQ9HBM0 779 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 IL23AQ9NPF7 189 aa5.21□□□□□ -1.57
SCAF11-212ENST00000549162 PTGESO14684 152 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 THAP12O43422 761 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 GSTM1P09488 218 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 UCHL3P15374 230 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 NOMO3P69849 1222 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 GSTM4Q03013 218 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 ACVR1Q04771 509 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 SIM2Q14190 667 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-212ENST00000549162 PAFAH1B3Q15102 231 aaKnown RBP5.21□□□□□ -1.58
SCAF11-212ENST00000549162 SV2CQ496J9 727 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 HSF5Q4G112 596 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-212ENST00000549162 E4F1Q66K89 784 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-212ENST00000549162 BRICD5Q6PL45 260 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 POTEGQ6S5H5 508 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 HOMER1Q86YM7 354 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 C3orf20Q8ND61 904 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 FBXL13Q8NEE6 735 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 OR6J1Q8NGC5 347 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 OTUD5Q96G74 571 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 ZNF599Q96NL3 588 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 DHRS4Q9BTZ2 278 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 INTS2Q9H0H0 1204 aaKnown RBP5.21□□□□□ -1.58
SCAF11-212ENST00000549162 WNT8AQ9H1J5 351 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 ZMYND8Q9ULU4 1186 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-212ENST00000549162 SCML2Q9UQR0 700 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 PCDHA11Q9Y5I1 949 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 COMMD10Q9Y6G5 202 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 ZNF233A6NK53 670 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 SIGLEC16A6NMB1 481 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 ATP2C2O75185 946 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 KIF4AO95239 1232 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 WISP3O95389 354 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-212ENST00000549162 HOXC4P09017 264 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-212ENST00000549162 TPM1P09493 284 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 FNTAP49354 379 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 HUNKP57058 714 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 ERVK-21P61565 698 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 E2F2Q14209 437 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 SNRNP35Q16560 246 aaKnown RBP5.21□□□□□ -1.58
SCAF11-212ENST00000549162 IFI16Q16666 785 aaKnown RBP5.21□□□□□ -1.58
SCAF11-212ENST00000549162 HSDL1Q3SXM5 330 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 LRIT3Q3SXY7 679 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 TDRD10Q5VZ19 366 aaKnown RBP5.21□□□□□ -1.58
SCAF11-212ENST00000549162 C9orf57Q5W0N0 161 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 RHBDF2Q6PJF5 856 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 CEP128Q6ZU80 1094 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 CBARPQ8N350 705 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-212ENST00000549162 ARHGAP18Q8N392 663 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 CYP2W1Q8TAV3 490 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 MAIP1Q8WWC4 291 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 E2F7Q96AV8 911 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 KREMEN1Q96MU8 473 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 FGFBP2Q9BYJ0 223 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 LATS2Q9NRM7 1088 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 ADAMTS1Q9UHI8 967 aa5.21□□□□□ -1.58
SCAF11-212ENST00000549162 MIA3Q5JRA6 1907 aa5.2□□□□□ -1.58
SCAF11-212ENST00000549162 A6NHS1 94 aa5.2□□□□□ -1.58
SCAF11-212ENST00000549162 E9PMD0 336 aa5.2□□□□□ -1.58
SCAF11-212ENST00000549162 MED7O43513 233 aa5.2□□□□□ -1.58
SCAF11-212ENST00000549162 PENKP01210 267 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms