RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 KRT39Q6A163 491 aa12.62□□□□□ -0.39
RAB5C-204ENST00000547517 POTEHQ6S545 545 aa12.62□□□□□ -0.39
RAB5C-204ENST00000547517 SLC44A3Q8N4M1 653 aa12.62□□□□□ -0.39
RAB5C-204ENST00000547517 B3GALNT2Q8NCR0 500 aa12.62□□□□□ -0.39
RAB5C-204ENST00000547517 CCDC150Q8NCX0 1101 aa12.62□□□□□ -0.39
RAB5C-204ENST00000547517 MYCBPAPQ8TBZ2 947 aa12.62□□□□□ -0.39
RAB5C-204ENST00000547517 NXPE3Q969Y0 559 aa12.62□□□□□ -0.39
RAB5C-204ENST00000547517 ASIC4Q96FT7 647 aa12.62□□□□□ -0.39
RAB5C-204ENST00000547517 PCED1BQ96HM7 432 aa12.62□□□□□ -0.39
RAB5C-204ENST00000547517 FUBP3Q96I24 572 aaKnown RBP eCLIP12.62□□□□□ -0.391e-6■■■□□ 14.6
RAB5C-204ENST00000547517 CEP63Q96MT8 703 aa12.62□□□□□ -0.39
RAB5C-204ENST00000547517 GCNAQ96QF7 691 aa12.62□□□□□ -0.39
RAB5C-204ENST00000547517 DUSP9Q99956 384 aaKnown RBP12.62□□□□□ -0.39
RAB5C-204ENST00000547517 RPP25Q9BUL9 199 aaKnown RBP12.62□□□□□ -0.39
RAB5C-204ENST00000547517 NIF3L1Q9GZT8 377 aa12.62□□□□□ -0.39
RAB5C-204ENST00000547517 NUP62CLQ9H1M0 184 aa12.62□□□□□ -0.39
RAB5C-204ENST00000547517 ATXN3LQ9H3M9 355 aa12.62□□□□□ -0.39
RAB5C-204ENST00000547517 APOBEC3GQ9HC16 384 aaKnown RBP12.62□□□□□ -0.39
RAB5C-204ENST00000547517 GDE1Q9NZC3 331 aa12.62□□□□□ -0.39
RAB5C-204ENST00000547517 MAGEC2Q9UBF1 373 aaPredicted RBP12.62□□□□□ -0.39
RAB5C-204ENST00000547517 HMGXB4Q9UGU5 601 aa12.62□□□□□ -0.39
RAB5C-204ENST00000547517 MAGED2Q9UNF1 606 aaPredicted RBP12.62□□□□□ -0.39
RAB5C-204ENST00000547517 LRRN2O75325 713 aa12.61□□□□□ -0.39
RAB5C-204ENST00000547517 MICAL2O94851 1124 aa12.61□□□□□ -0.39
RAB5C-204ENST00000547517 FGF19O95750 216 aa12.61□□□□□ -0.39
RAB5C-204ENST00000547517 CFHP08603 1231 aa12.61□□□□□ -0.39
RAB5C-204ENST00000547517 FAM163BP0C2L3 166 aa12.61□□□□□ -0.39
RAB5C-204ENST00000547517 PTPN1P18031 435 aaKnown RBP12.61□□□□□ -0.39
RAB5C-204ENST00000547517 BDNFP23560 247 aa12.61□□□□□ -0.39
RAB5C-204ENST00000547517 CYP4F8P98187 520 aa12.61□□□□□ -0.39
RAB5C-204ENST00000547517 CBWD6Q4V339 395 aa12.61□□□□□ -0.39
RAB5C-204ENST00000547517 CBWD3Q5JTY5 395 aa12.61□□□□□ -0.39
RAB5C-204ENST00000547517 FAM78AQ5JUQ0 283 aa12.61□□□□□ -0.39
RAB5C-204ENST00000547517 CBWD5Q5RIA9 395 aa12.61□□□□□ -0.39
RAB5C-204ENST00000547517 STXBP5Q5T5C0 1151 aa12.61□□□□□ -0.39
RAB5C-204ENST00000547517 GAREM2Q75VX8 874 aa12.61□□□□□ -0.39
RAB5C-204ENST00000547517 SEMA4DQ92854 862 aa12.61□□□□□ -0.39
RAB5C-204ENST00000547517 ZSWIM3Q96MP5 696 aa12.61□□□□□ -0.39
RAB5C-204ENST00000547517 ZNF518BQ9C0D4 1074 aa12.61□□□□□ -0.39
RAB5C-204ENST00000547517 FBXL21Q9UKT6 434 aa12.61□□□□□ -0.39
RAB5C-204ENST00000547517 MYO10Q9HD67 2058 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 SLC38A8A6NNN8 435 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 GOLGA6L22H0YM25 854 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 CLDN5O00501 218 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 PDGFBP01127 241 aaPredicted RBP12.6□□□□□ -0.39
RAB5C-204ENST00000547517 CSH1P0DML2 217 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 CSH2P0DML3 217 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 SRFP11831 508 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 CD58P19256 250 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 FCARP24071 287 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 ANXA13P27216 316 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 CDC25CP30307 473 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 GRIK1P39086 918 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 MAGEA11P43364 429 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 NDST1P52848 882 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 ARHGAP15Q53QZ3 475 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 GPR158Q5T848 1215 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 FILIP1Q7Z7B0 1213 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 FBXL13Q8NEE6 735 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 ZSCAN18Q8TBC5 510 aaPredicted RBP12.6□□□□□ -0.39
RAB5C-204ENST00000547517 SLC35C1Q96A29 364 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 PBXIP1Q96AQ6 731 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 TNIP3Q96KP6 325 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 ASB16Q96NS5 453 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 BCO2Q9BYV7 579 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 IL21Q9HBE4 155 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 METTL14Q9HCE5 456 aaKnown RBP12.6□□□□□ -0.39
RAB5C-204ENST00000547517 RAB20Q9NX57 234 aa12.6□□□□□ -0.39
RAB5C-204ENST00000547517 PTPRDP23468 1912 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 TRIM66O15016 1216 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 ECI2O75521 394 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 NOL4O94818 638 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 CCDC130P13994 396 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 HMGA1P17096 107 aaKnown RBP12.59□□□□□ -0.39
RAB5C-204ENST00000547517 CACNA2D1P54289 1103 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 NLRP12P59046 1061 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 MCCD1P59942 119 aaPredicted RBP12.59□□□□□ -0.39
RAB5C-204ENST00000547517 GRM2Q14416 872 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 WDR44Q5JSH3 913 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 TANGO2Q6ICL3 276 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 FOXR2Q6PJQ5 311 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 VSTM1Q6UX27 236 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 FRMD5Q7Z6J6 570 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 ACOT1Q86TX2 421 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 FAM35AQ86V20 835 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 SIX5Q8N196 739 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 GPT2Q8TD30 523 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 SMARCD2Q92925 531 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 ELSPBP1Q96BH3 223 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 MED10Q9BTT4 135 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 B3GNT5Q9BYG0 378 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 PLA2G2FQ9BZM2 168 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 ELOVL4Q9GZR5 314 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 ZFP14Q9HCL3 533 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 KRT82Q9NSB4 513 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 RAPGEFL1Q9UHV5 662 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 RWDD2AQ9UIY3 292 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 CA14Q9ULX7 337 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 NCANO14594 1321 aa12.59□□□□□ -0.39
RAB5C-204ENST00000547517 ATP8B3O60423 1300 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms