RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 LRPAP1P30533 357 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 MCM4P33991 863 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 TNFSF9P41273 254 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 BRCC3P46736 316 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 POU5F1Q01860 360 aaKnown RBP8.33□□□□□ -1.08
SNHG1-223ENST00000545440 RAB33AQ14088 237 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 SEZ6Q53EL9 994 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 ZC2HC1CQ53FD0 456 aaPredicted RBP8.33□□□□□ -1.08
SNHG1-223ENST00000545440 SLFN12LQ6IEE8 588 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 SLC8B1Q6J4K2 584 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 HFE2Q6ZVN8 426 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 RTL10Q7L3V2 364 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 ZNF720Q7Z2F6 126 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 BMP8AQ7Z5Y6 402 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 CD302Q8IX05 232 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 UBALD2Q8IYN6 164 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 FEZF2Q8TBJ5 459 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 KCNG4Q8TDN1 519 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 EPS8L3Q8TE67 593 aaKnown RBP8.33□□□□□ -1.08
SNHG1-223ENST00000545440 SMG7Q92540 1137 aaKnown RBP8.33□□□□□ -1.08
SNHG1-223ENST00000545440 C18orf25Q96B23 403 aaPredicted RBP8.33□□□□□ -1.08
SNHG1-223ENST00000545440 STRA6Q9BX79 667 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 CHRDQ9H2X0 955 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 SUV39H2Q9H5I1 410 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 MRPL44Q9H9J2 332 aaKnown RBP8.33□□□□□ -1.08
SNHG1-223ENST00000545440 RPF1Q9H9Y2 349 aaKnown RBP8.33□□□□□ -1.08
SNHG1-223ENST00000545440 MAGEF1Q9HAY2 307 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 DNAJB12Q9NXW2 375 aaKnown RBP8.33□□□□□ -1.08
SNHG1-223ENST00000545440 FAM8A1Q9UBU6 413 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 CPSF3Q9UKF6 684 aaKnown RBP8.33□□□□□ -1.08
SNHG1-223ENST00000545440 EXOC7Q9UPT5 735 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 NUB1Q9Y5A7 615 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 CDY1Q9Y6F8 540 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 STYXL1Q9Y6J8 313 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 TMEM221A6NGB7 291 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 H7C4K7 107 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 I3L4J1 428 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 M0R296 226 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 ADAM12O43184 909 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 SPATA31D3P0C874 917 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 IGFBP6P24592 240 aaPredicted RBP8.32□□□□□ -1.08
SNHG1-223ENST00000545440 GSTT1P30711 240 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 OR1D2P34982 312 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 AARSP49588 968 aaKnown RBP eCLIP8.32□□□□□ -1.085e-21■□□□□ 9.8
SNHG1-223ENST00000545440 ROR1Q01973 937 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 TAGLNQ01995 201 aaKnown RBP8.32□□□□□ -1.08
SNHG1-223ENST00000545440 ZBTB6Q15916 424 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 UVSSAQ2YD98 709 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 ZBTB41Q5SVQ8 909 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 L1TD1Q5T7N2 865 aaKnown RBP8.32□□□□□ -1.08
SNHG1-223ENST00000545440 ADALQ6DHV7 355 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 ZNF280DQ6N043 979 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 SPATA31D4Q6ZUB0 917 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 FAM35AQ86V20 835 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 PDILTQ8N807 584 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 ASIC4Q96FT7 647 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 MFSD14AQ96MC6 490 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 LRRC27Q9C0I9 530 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 KCNH6Q9H252 994 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 C12orf49Q9H741 205 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 LIN7BQ9HAP6 207 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 PIDD1Q9HB75 910 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 KBTBD4Q9NVX7 518 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 EPS15L1Q9UBC2 864 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 SALL4Q9UJQ4 1053 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 CFAP45Q9UL16 551 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 DERAQ9Y315 318 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 C2CD2Q9Y426 696 aa8.32□□□□□ -1.08
SNHG1-223ENST00000545440 LACTBL1A8MY62 500 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 TISP43B9A030 160 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 ANKRD63C9JTQ0 380 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 M0QZQ0 153 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 LCE2BO14633 110 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 TBC1D4O60343 1298 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 GCNT3O95395 438 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 ASGR2P07307 311 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 NFICP08651 508 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 VSIG8P0DPA2 414 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 IDEP14735 1019 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 PAX3P23760 479 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 CASP5P51878 434 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 AMPD3Q01432 767 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 SRSF11Q05519 484 aaKnown RBP8.31□□□□□ -1.08
SNHG1-223ENST00000545440 SPAG1Q07617 926 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 PKP1Q13835 747 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 MRPL58Q14197 206 aaKnown RBP8.31□□□□□ -1.08
SNHG1-223ENST00000545440 TMEM132DQ14C87 1099 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 POSTNQ15063 836 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 PPM1LQ5SGD2 360 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 AXDND1Q5T1B0 1012 aaPredicted RBP8.31□□□□□ -1.08
SNHG1-223ENST00000545440 SPATA1Q5VX52 437 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 JADE1Q6IE81 842 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 CNNM4Q6P4Q7 775 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 SHC4Q6S5L8 630 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 RSPO2Q6UXX9 243 aaPredicted RBP8.31□□□□□ -1.08
SNHG1-223ENST00000545440 STXBP4Q6ZWJ1 553 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 NT5DC4Q86YG4 428 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 CCDC65Q8IXS2 484 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 IQUBQ8NA54 791 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 APPL2Q8NEU8 664 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms