RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 SPATA1Q5VX52 437 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 PEAR1Q5VY43 1037 aaPredicted RBP10.16□□□□□ -0.78
CHD4-212ENST00000545083 C9orf57Q5W0N0 161 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 RINT1Q6NUQ1 792 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 SLC23A3Q6PIS1 610 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 ZPBP2Q6X784 338 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 C1orf186Q6ZWK4 172 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 LPCAT2Q7L5N7 544 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 EFCAB13Q8IY85 973 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 C4orf32Q8N8J7 132 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 NSUN7Q8NE18 718 aaKnown RBP10.16□□□□□ -0.78
CHD4-212ENST00000545083 SPPL2BQ8TCT7 592 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 MRPS31Q92665 395 aaKnown RBP10.16□□□□□ -0.78
CHD4-212ENST00000545083 ATP2A3Q93084 1043 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 DRC1Q96MC2 740 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 NTPCRQ9BSD7 190 aaKnown RBP10.16□□□□□ -0.78
CHD4-212ENST00000545083 LINC00597Q9H2U6 94 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 TMLHEQ9NVH6 421 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 PILRBQ9UKJ0 227 aa10.16□□□□□ -0.78
CHD4-212ENST00000545083 MAGED2Q9UNF1 606 aaPredicted RBP10.16□□□□□ -0.78
CHD4-212ENST00000545083 TNRC6BQ9UPQ9 1833 aaKnown RBP10.16□□□□□ -0.78
CHD4-212ENST00000545083 OBSL1O75147 1896 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 ANO9A1A5B4 782 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 PP2D1A8MPX8 630 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 PIRO00625 290 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 CFIP05156 583 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 NFICP08651 508 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 CD59P13987 128 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 MATR3P43243 847 aaKnown RBP eCLIP10.15□□□□□ -0.78
CHD4-212ENST00000545083 FXR2P51116 673 aaKnown RBP eCLIP10.15□□□□□ -0.782e-11■■■■■ 31.6
CHD4-212ENST00000545083 GUCY1B3Q02153 619 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 RAD51AP2Q09MP3 1159 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 NBR1Q14596 966 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 ME3Q16798 604 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 MAP7D1Q3KQU3 841 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 LYSMD4Q5XG99 296 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 WSCD1Q658N2 575 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 JADE1Q6IE81 842 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 ALLCQ8N6M5 410 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 PNPLA1Q8N8W4 532 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 MDM1Q8TC05 714 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 SNX29Q8TEQ0 813 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 HNRNPLLQ8WVV9 542 aaKnown RBP10.15□□□□□ -0.78
CHD4-212ENST00000545083 SPIRE2Q8WWL2 714 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 EXOC4Q96A65 974 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 CAMK1GQ96NX5 476 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 PI4K2AQ9BTU6 479 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 GTPBP2Q9BX10 602 aaKnown RBP10.15□□□□□ -0.78
CHD4-212ENST00000545083 C17orf75Q9HAS0 396 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 TRPC7Q9HCX4 862 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 ZDHHC4Q9NPG8 344 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 LRWD1Q9UFC0 647 aa10.15□□□□□ -0.78
CHD4-212ENST00000545083 CIZ1Q9ULV3 898 aaPredicted RBP10.15□□□□□ -0.78
CHD4-212ENST00000545083 ANK1P16157 1881 aa10.15□□□□□ -0.79
CHD4-212ENST00000545083 ZNF638Q14966 1978 aaKnown RBP10.14□□□□□ -0.79
CHD4-212ENST00000545083 SGK1O00141 431 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 CYB561D2O14569 222 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 MAP3K13O43283 966 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 XPOTO43592 962 aaKnown RBP10.14□□□□□ -0.79
CHD4-212ENST00000545083 PRPF40AO75400 957 aaKnown RBP10.14□□□□□ -0.79
CHD4-212ENST00000545083 CSH1P0DML2 217 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 CSH2P0DML3 217 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 PLS3P13797 630 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 CDC25AP30304 524 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 VASPP50552 380 aaPredicted RBP10.14□□□□□ -0.79
CHD4-212ENST00000545083 SAFBQ15424 915 aaKnown RBP eCLIP10.14□□□□□ -0.79
CHD4-212ENST00000545083 DDR2Q16832 855 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 CCDC142Q17RM4 750 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 ZNF423Q2M1K9 1284 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 EMC10Q5UCC4 262 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 CENPQQ7L2Z9 268 aaPredicted RBP10.14□□□□□ -0.79
CHD4-212ENST00000545083 HDDC3Q8N4P3 179 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 IL17RCQ8NAC3 791 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 TXNDC5Q8NBS9 432 aaKnown RBP10.14□□□□□ -0.79
CHD4-212ENST00000545083 ADAM32Q8TC27 787 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 SH3RF2Q8TEC5 729 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 LRRC15Q8TF66 581 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 C2orf15Q8WU43 125 aaKnown RBP10.14□□□□□ -0.79
CHD4-212ENST00000545083 GTF3C6Q969F1 213 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 PYM1Q9BRP8 204 aaKnown RBP10.14□□□□□ -0.79
CHD4-212ENST00000545083 CAPN10Q9HC96 672 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 GCNT4Q9P109 453 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 SLC6A14Q9UN76 642 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 DNM3Q9UQ16 869 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 RAXQ9Y2V3 346 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.14□□□□□ -0.79
CHD4-212ENST00000545083 SCN1AP35498 2009 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 PCDH15Q96QU1 1955 aa10.14□□□□□ -0.79
CHD4-212ENST00000545083 ADAMTS9Q9P2N4 1935 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 URB1O60287 2271 aaKnown RBP10.13□□□□□ -0.79
CHD4-212ENST00000545083 KALRNO60229 2985 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 C2orf78A6NCI8 922 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 EPB41L2O43491 1005 aaKnown RBP10.13□□□□□ -0.79
CHD4-212ENST00000545083 SH3BP5O60239 455 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 OPHN1O60890 802 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 ADAM23O75077 832 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 ALDH1A2O94788 518 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 NOL4O94818 638 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 KLF8O95600 359 aaPredicted RBP10.13□□□□□ -0.79
CHD4-212ENST00000545083 CKMP06732 381 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms