RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 PPP4R1LQ9P1A2 415 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 HSFX1Q9UBD0 423 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 GTF2A1LQ9UNN4 478 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 PAXBP1Q9Y5B6 917 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 TSPOAP1O95153 1857 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 LOC102723971A0A1B0GUV8 181 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 B8ZZF3 427 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 hCG_1984214I3L0E3 225 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 ZNF185O15231 689 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 GCSHP23434 173 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 MGAT1P26572 445 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 ACVR2AP27037 513 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 SERPINF1P36955 418 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 VIPR2P41587 438 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 MAPK9P45984 424 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 CCT5P48643 541 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 PTDSS1P48651 473 aaKnown RBP4.38□□□□□ -1.71
SCFD1-207ENST00000544052 ZNF134P52741 427 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 POU5F1BQ06416 359 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 IQCB1Q15051 598 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 RALBP1Q15311 655 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 NPY5RQ15761 445 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 TIGD6Q17RP2 521 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 PRR16Q569H4 304 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 PLAG1Q6DJT9 500 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 TAPT1Q6NXT6 567 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 TAF2Q6P1X5 1199 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 PAF1Q8N7H5 531 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 IPCEF1Q8WWN9 437 aaPredicted RBP4.38□□□□□ -1.71
SCFD1-207ENST00000544052 PPP1R9BQ96SB3 815 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 NELL2Q99435 816 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 ZSWIM1Q9BR11 485 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 TMEM120AQ9BXJ8 343 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 UBA5Q9GZZ9 404 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 TM7SF3Q9NS93 570 aa4.38□□□□□ -1.71
SCFD1-207ENST00000544052 ZFR2Q9UPR6 939 aaKnown RBP4.38□□□□□ -1.71
SCFD1-207ENST00000544052 MRPS17Q9Y2R5 130 aaKnown RBP4.38□□□□□ -1.71
SCFD1-207ENST00000544052 USP15Q9Y4E8 981 aaPredicted RBP4.38□□□□□ -1.71
SCFD1-207ENST00000544052 IPO5O00410 1097 aaKnown RBP4.37□□□□□ -1.71
SCFD1-207ENST00000544052 DHRS4L1P0CG22 281 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 APOBEC3AP31941 199 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-207ENST00000544052 CPT1AP50416 773 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 RABGGTBP53611 331 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 COPAP53621 1224 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 MC2RQ01718 297 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 KRT17Q04695 432 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 PRKG1Q13976 671 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 ARHGEF7Q14155 803 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 TBC1D10BQ4KMP7 808 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-207ENST00000544052 LIMS2Q7Z4I7 341 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 OR1N1Q8NGS0 311 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 LTV1Q96GA3 475 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-207ENST00000544052 SNX27Q96L92 541 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 SMOQ99835 787 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 PAGR1Q9BTK6 254 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 PCDHAC1Q9H158 963 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 MSL2Q9HCI7 577 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 XPNPEP3Q9NQH7 507 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 NECTIN3Q9NQS3 549 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 RRN3Q9NYV6 651 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 ZMYND8Q9ULU4 1186 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-207ENST00000544052 MAPKBP1O60336 1514 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 SYT5O00445 386 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 ASNA1O43681 348 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 AGR2O95994 175 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 PECAM1P16284 738 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-207ENST00000544052 TPH1P17752 444 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 ATICP31939 592 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 HSD11B2P80365 405 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 PPFIA1Q13136 1202 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 PTK2BQ14289 1009 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 SURF1Q15526 300 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 TMTC4Q5T4D3 741 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 AGAP9Q5VTM2 703 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 LVRNQ6Q4G3 990 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 KRT28Q7Z3Y7 464 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 GAS2L3Q86XJ1 694 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 OR56A1Q8NGH5 318 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 FAM71BQ8TC56 605 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 PNISRQ8TF01 805 aaKnown RBP4.37□□□□□ -1.71
SCFD1-207ENST00000544052 MIEF2Q96C03 454 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 GCC1Q96CN9 775 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 MPHOSPH9Q99550 1183 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 NAP1L4Q99733 375 aaKnown RBP4.37□□□□□ -1.71
SCFD1-207ENST00000544052 EIF2AK1Q9BQI3 630 aaKnown RBP4.37□□□□□ -1.71
SCFD1-207ENST00000544052 TEX101Q9BY14 249 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 EIF2AQ9BY44 585 aaKnown RBP4.37□□□□□ -1.71
SCFD1-207ENST00000544052 CTTNBP2NLQ9P2B4 639 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 DNMT3BQ9UBC3 853 aaKnown RBP4.37□□□□□ -1.71
SCFD1-207ENST00000544052 DKK4Q9UBT3 224 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 CLCA2Q9UQC9 943 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 SLC30A1Q9Y6M5 507 aa4.37□□□□□ -1.71
SCFD1-207ENST00000544052 NPEPPSL1A6NEC2 478 aa4.36□□□□□ -1.71
SCFD1-207ENST00000544052 GPR42O15529 346 aa4.36□□□□□ -1.71
SCFD1-207ENST00000544052 KCNQ3O43525 872 aa4.36□□□□□ -1.71
SCFD1-207ENST00000544052 RRP9O43818 475 aaKnown RBP4.36□□□□□ -1.71
SCFD1-207ENST00000544052 RAD17O75943 681 aa4.36□□□□□ -1.71
SCFD1-207ENST00000544052 USP1O94782 785 aa4.36□□□□□ -1.71
SCFD1-207ENST00000544052 CYP2C9P11712 490 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms