RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 FAM183BPQ6ZVS7 135 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 ECHDC2Q86YB7 292 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 PRELID2Q8N945 189 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 ACSF2Q96CM8 615 aaPredicted RBP12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 C18orf8Q96DM3 657 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 DEFB118Q96PH6 123 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 TRAIPQ9BWF2 469 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 RSAD1Q9HA92 442 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 PAK6Q9NQU5 681 aaPredicted RBP12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 METTL5Q9NRN9 209 aaKnown RBP12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 INPP5FQ9Y2H2 1132 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 PTPN22Q9Y2R2 807 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 TIMM13Q9Y5L4 95 aaPredicted RBP12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 TSC2P49815 1807 aa12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 HEXIM1O94992 359 aaKnown RBP12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 PNPLA4P41247 253 aa12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 RABGGTBP53611 331 aa12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 RWDD2BP57060 319 aa12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 PDE4CQ08493 712 aa12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 PAN2Q504Q3 1202 aaKnown RBP12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 ARHGAP17Q68EM7 881 aa12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 PPP1R2P3Q6NXS1 205 aa12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 TTC27Q6P3X3 843 aa12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 TMCO3Q6UWJ1 677 aa12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 CCNI2Q6ZMN8 369 aaPredicted RBP12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 UNC93AQ86WB7 457 aa12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 FAM126BQ8IXS8 530 aa12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 CRYBG2Q8N1P7 616 aa12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 APPL2Q8NEU8 664 aa12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 MCRS1Q96EZ8 462 aa12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 GDAP1L1Q96MZ0 367 aa12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 FAM124BQ9H5Z6 455 aaPredicted RBP12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 ARGLU1Q9NWB6 273 aaPredicted RBP12.96□□□□□ -0.33
AP003559.1-201ENST00000540906 SCN5AQ14524 2016 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 SIGLEC16A6NMB1 481 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 C9IYK1 514 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 KBTBD13C9JR72 458 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 CLDN5O00501 218 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 SART1O43290 800 aaKnown RBP12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 NBNO60934 754 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 WARSP23381 471 aaKnown RBP12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 MAN1A1P33908 653 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 SLC1A1P43005 524 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 GSCP56915 257 aaPredicted RBP12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 UPP1Q16831 310 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 DCUN1D2Q6PH85 259 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 SLC13A5Q86YT5 568 aaPredicted RBP12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 SLC35F5Q8WV83 523 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 CASKIN2Q8WXE0 1202 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 SENP8Q96LD8 212 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 FUT8Q9BYC5 575 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 SNX25Q9H3E2 840 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 ST7Q9NRC1 585 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 STIM2Q9P246 746 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 PCDH10Q9P2E7 1040 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 IP6K2Q9UHH9 426 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 AMACRQ9UHK6 382 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 KIAA1257Q9ULG3 409 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 TET1Q8NFU7 2136 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 BHMG1C9JSJ3 638 aaPredicted RBP12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 PI4K2BG5E9Z4 385 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 TTI1O43156 1089 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 HUS1O60921 280 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 GRAP2O75791 330 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 ITGB1P05556 798 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 RARAP10276 462 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 KRT3P12035 628 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 SSR1P43307 286 aaKnown RBP12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 BRCC3P46736 316 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 MNX1P50219 401 aaPredicted RBP12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 ZNF268Q14587 947 aaPredicted RBP12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 TIGD5Q53EQ6 642 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 CLLU1OSQ5K130 101 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 SH3PXD2AQ5TCZ1 1133 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 SEL1L2Q5TEA6 688 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 PAQR9Q6ZVX9 377 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 TTC39CQ8N584 583 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 TOP6BLQ8N6T0 577 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 SLC2A14Q8TDB8 520 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 HASPINQ8TF76 798 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 CLEC4CQ8WTT0 213 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 HNRNPLLQ8WVV9 542 aaKnown RBP12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 KHSRPQ92945 711 aaKnown RBP eCLIP12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 TRIM51Q9BSJ1 452 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 SLC4A5Q9BY07 1137 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 B3GNT5Q9BYG0 378 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 GDF3Q9NR23 364 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 RGS18Q9NS28 235 aa12.95□□□□□ -0.34
AP003559.1-201ENST00000540906 DNM1LO00429 736 aa12.94□□□□□ -0.34
AP003559.1-201ENST00000540906 GABRDO14764 452 aa12.94□□□□□ -0.34
AP003559.1-201ENST00000540906 CAND2O75155 1236 aa12.94□□□□□ -0.34
AP003559.1-201ENST00000540906 BEST1O76090 585 aa12.94□□□□□ -0.34
AP003559.1-201ENST00000540906 CCL5P13501 91 aa12.94□□□□□ -0.34
AP003559.1-201ENST00000540906 IL1R2P27930 398 aa12.94□□□□□ -0.34
AP003559.1-201ENST00000540906 CARSP49589 748 aaKnown RBP12.94□□□□□ -0.34
AP003559.1-201ENST00000540906 RAB27AP51159 221 aa12.94□□□□□ -0.34
AP003559.1-201ENST00000540906 GUCY2DQ02846 1103 aa12.94□□□□□ -0.34
AP003559.1-201ENST00000540906 ADCY2Q08462 1091 aa12.94□□□□□ -0.34
AP003559.1-201ENST00000540906 ARHGEF6Q15052 776 aa12.94□□□□□ -0.34
AP003559.1-201ENST00000540906 OR6B2Q6IFH4 312 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms