RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PTPN1P18031 435 aaKnown RBP18.03■□□□□ 0.48
CD9-209ENST00000540891 MXI1P50539 228 aa18.03■□□□□ 0.48
CD9-209ENST00000540891 NOP14P78316 857 aaKnown RBP18.03■□□□□ 0.48
CD9-209ENST00000540891 VEPH1Q14D04 833 aa18.03■□□□□ 0.48
CD9-209ENST00000540891 DCAF17Q5H9S7 520 aaPredicted RBP18.03■□□□□ 0.48
CD9-209ENST00000540891 MDH1BQ5I0G3 518 aa18.03■□□□□ 0.48
CD9-209ENST00000540891 ITIH5Q86UX2 942 aa18.03■□□□□ 0.48
CD9-209ENST00000540891 FAM200AQ8TCP9 573 aa18.03■□□□□ 0.48
CD9-209ENST00000540891 GPT2Q8TD30 523 aa18.03■□□□□ 0.48
CD9-209ENST00000540891 HMGXB4Q9UGU5 601 aa18.03■□□□□ 0.48
CD9-209ENST00000540891 ARMCX3Q9UH62 379 aaPredicted RBP18.03■□□□□ 0.48
CD9-209ENST00000540891 STX10O60499 249 aa18.02■□□□□ 0.48
CD9-209ENST00000540891 CLSTN1O94985 981 aa18.02■□□□□ 0.48
CD9-209ENST00000540891 P4HA1P13674 534 aa18.02■□□□□ 0.48
CD9-209ENST00000540891 FCARP24071 287 aa18.02■□□□□ 0.48
CD9-209ENST00000540891 MAGEA11P43364 429 aa18.02■□□□□ 0.48
CD9-209ENST00000540891 MAPRE1Q15691 268 aaKnown RBP18.02■□□□□ 0.48
CD9-209ENST00000540891 FAM78AQ5JUQ0 283 aa18.02■□□□□ 0.48
CD9-209ENST00000540891 STXBP5Q5T5C0 1151 aa18.02■□□□□ 0.48
CD9-209ENST00000540891 TCERG1LQ5VWI1 586 aa18.02■□□□□ 0.48
CD9-209ENST00000540891 C4orf50Q6ZRC1 276 aa18.02■□□□□ 0.48
CD9-209ENST00000540891 HFE2Q6ZVN8 426 aa18.02■□□□□ 0.48
CD9-209ENST00000540891 FRMD5Q7Z6J6 570 aa18.02■□□□□ 0.48
CD9-209ENST00000540891 B3GALNT2Q8NCR0 500 aa18.02■□□□□ 0.48
CD9-209ENST00000540891 NUP62CLQ9H1M0 184 aa18.02■□□□□ 0.48
CD9-209ENST00000540891 MAGEC2Q9UBF1 373 aaPredicted RBP18.02■□□□□ 0.48
CD9-209ENST00000540891 BDNFP23560 247 aa18.01■□□□□ 0.47
CD9-209ENST00000540891 GABRR2P28476 465 aa18.01■□□□□ 0.47
CD9-209ENST00000540891 CACNA2D1P54289 1103 aa18.01■□□□□ 0.47
CD9-209ENST00000540891 RPL10AP62906 217 aaKnown RBP18.01■□□□□ 0.47
CD9-209ENST00000540891 CYP27A1Q02318 531 aa18.01■□□□□ 0.47
CD9-209ENST00000540891 MTSS1LQ765P7 747 aa18.01■□□□□ 0.47
CD9-209ENST00000540891 BMP8AQ7Z5Y6 402 aa18.01■□□□□ 0.47
CD9-209ENST00000540891 TMEM150AQ86TG1 271 aa18.01■□□□□ 0.47
CD9-209ENST00000540891 FBXL13Q8NEE6 735 aa18.01■□□□□ 0.47
CD9-209ENST00000540891 ASB16Q96NS5 453 aa18.01■□□□□ 0.47
CD9-209ENST00000540891 KXD1Q9BQD3 176 aa18.01■□□□□ 0.47
CD9-209ENST00000540891 B3GNT5Q9BYG0 378 aa18.01■□□□□ 0.47
CD9-209ENST00000540891 PLA2G2FQ9BZM2 168 aa18.01■□□□□ 0.47
CD9-209ENST00000540891 METTL14Q9HCE5 456 aaKnown RBP18.01■□□□□ 0.47
CD9-209ENST00000540891 TMEM30AQ9NV96 361 aa18.01■□□□□ 0.47
CD9-209ENST00000540891 RAB20Q9NX57 234 aa18.01■□□□□ 0.47
CD9-209ENST00000540891 COQ4Q9Y3A0 265 aa18.01■□□□□ 0.47
CD9-209ENST00000540891 NCANO14594 1321 aa18■□□□□ 0.47
CD9-209ENST00000540891 PTPRDP23468 1912 aa18■□□□□ 0.47
CD9-209ENST00000540891 SLC38A8A6NNN8 435 aa18■□□□□ 0.47
CD9-209ENST00000540891 CLDN5O00501 218 aa18■□□□□ 0.47
CD9-209ENST00000540891 NOL4O94818 638 aa18■□□□□ 0.47
CD9-209ENST00000540891 PDGFBP01127 241 aaPredicted RBP18■□□□□ 0.47
CD9-209ENST00000540891 F11P03951 625 aa18■□□□□ 0.47
CD9-209ENST00000540891 SRFP11831 508 aa18■□□□□ 0.47
CD9-209ENST00000540891 NDST1P52848 882 aa18■□□□□ 0.47
CD9-209ENST00000540891 INCA1Q0VD86 236 aa18■□□□□ 0.47
CD9-209ENST00000540891 ORC1Q13415 861 aa18■□□□□ 0.47
CD9-209ENST00000540891 TANGO2Q6ICL3 276 aa18■□□□□ 0.47
CD9-209ENST00000540891 VSTM1Q6UX27 236 aa18■□□□□ 0.47
CD9-209ENST00000540891 PAQR9Q6ZVX9 377 aa18■□□□□ 0.47
CD9-209ENST00000540891 SCN4BQ8IWT1 228 aa18■□□□□ 0.47
CD9-209ENST00000540891 TWNKQ96RR1 684 aa18■□□□□ 0.47
CD9-209ENST00000540891 IMPG2Q9BZV3 1241 aa18■□□□□ 0.47
CD9-209ENST00000540891 ZNF518BQ9C0D4 1074 aa18■□□□□ 0.47
CD9-209ENST00000540891 NIF3L1Q9GZT8 377 aa18■□□□□ 0.47
CD9-209ENST00000540891 ATXN3LQ9H3M9 355 aa18■□□□□ 0.47
CD9-209ENST00000540891 RWDD2AQ9UIY3 292 aa18■□□□□ 0.47
CD9-209ENST00000540891 ECI2O75521 394 aa17.99■□□□□ 0.47
CD9-209ENST00000540891 TADA3O75528 432 aa17.99■□□□□ 0.47
CD9-209ENST00000540891 FGF19O95750 216 aa17.99■□□□□ 0.47
CD9-209ENST00000540891 CSH1P0DML2 217 aa17.99■□□□□ 0.47
CD9-209ENST00000540891 CSH2P0DML3 217 aa17.99■□□□□ 0.47
CD9-209ENST00000540891 MARSP56192 900 aaKnown RBP17.99■□□□□ 0.47
CD9-209ENST00000540891 NLRP12P59046 1061 aa17.99■□□□□ 0.47
CD9-209ENST00000540891 CYP4F8P98187 520 aa17.99■□□□□ 0.47
CD9-209ENST00000540891 CCDC40Q4G0X9 1142 aa17.99■□□□□ 0.47
CD9-209ENST00000540891 ACOT1Q86TX2 421 aa17.99■□□□□ 0.47
CD9-209ENST00000540891 UNC93AQ86WB7 457 aa17.99■□□□□ 0.47
CD9-209ENST00000540891 CRYBG2Q8N1P7 616 aa17.99■□□□□ 0.47
CD9-209ENST00000540891 MLKLQ8NB16 471 aa17.99■□□□□ 0.47
CD9-209ENST00000540891 ZSCAN18Q8TBC5 510 aaPredicted RBP17.99■□□□□ 0.47
CD9-209ENST00000540891 WHAMMQ8TF30 809 aa17.99■□□□□ 0.47
CD9-209ENST00000540891 ELSPBP1Q96BH3 223 aa17.99■□□□□ 0.47
CD9-209ENST00000540891 MYRFLQ96LU7 910 aa17.99■□□□□ 0.47
CD9-209ENST00000540891 SRRTQ9BXP5 876 aaKnown RBP17.99■□□□□ 0.47
CD9-209ENST00000540891 CYP3A43Q9HB55 503 aa17.99■□□□□ 0.47
CD9-209ENST00000540891 CFHP08603 1231 aa17.98■□□□□ 0.47
CD9-209ENST00000540891 CDC25CP30307 473 aa17.98■□□□□ 0.47
CD9-209ENST00000540891 GRIK1P39086 918 aa17.98■□□□□ 0.47
CD9-209ENST00000540891 FMO5P49326 533 aa17.98■□□□□ 0.47
CD9-209ENST00000540891 GPC5P78333 572 aa17.98■□□□□ 0.47
CD9-209ENST00000540891 DPCR1Q3MIW9 517 aa17.98■□□□□ 0.47
CD9-209ENST00000540891 TRIM59Q8IWR1 403 aa17.98■□□□□ 0.47
CD9-209ENST00000540891 CCDC150Q8NCX0 1101 aa17.98■□□□□ 0.47
CD9-209ENST00000540891 SMARCD2Q92925 531 aa17.98■□□□□ 0.47
CD9-209ENST00000540891 TATDN2Q93075 761 aa17.98■□□□□ 0.47
CD9-209ENST00000540891 PBXIP1Q96AQ6 731 aa17.98■□□□□ 0.47
CD9-209ENST00000540891 RSPRY1Q96DX4 576 aa17.98■□□□□ 0.47
CD9-209ENST00000540891 TRMT2BQ96GJ1 504 aaKnown RBP17.98■□□□□ 0.47
CD9-209ENST00000540891 FAXDC2Q96IV6 333 aa17.98■□□□□ 0.47
CD9-209ENST00000540891 TNIP3Q96KP6 325 aa17.98■□□□□ 0.47
CD9-209ENST00000540891 SPATA17Q96L03 361 aa17.98■□□□□ 0.47
CD9-209ENST00000540891 ARID3AQ99856 593 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms