RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 ZNF268Q14587 947 aaPredicted RBP8.65□□□□□ -1.02
LRP6-204ENST00000540415 ENOX2Q16206 610 aaKnown RBP8.65□□□□□ -1.02
LRP6-204ENST00000540415 DDR2Q16832 855 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 ZNF423Q2M1K9 1284 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 LYSMD4Q5XG99 296 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 CCNI2Q6ZMN8 369 aaPredicted RBP8.65□□□□□ -1.02
LRP6-204ENST00000540415 KCNK18Q7Z418 384 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 SLCO6A1Q86UG4 719 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 HDDC3Q8N4P3 179 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 IL17RCQ8NAC3 791 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 TXNDC5Q8NBS9 432 aaKnown RBP8.65□□□□□ -1.02
LRP6-204ENST00000540415 TMEM161BQ8NDZ6 487 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 ERMNQ8TAM6 284 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 SH3RF2Q8TEC5 729 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 LRRC15Q8TF66 581 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 HMGB4Q8WW32 186 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 ERLEC1Q96DZ1 483 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 PI4K2AQ9BTU6 479 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 KIF9Q9HAQ2 790 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 CAPN10Q9HC96 672 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 BRMS1Q9HCU9 246 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 CACNA2D2Q9NY47 1150 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 HSFX1Q9UBD0 423 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 SLC6A14Q9UN76 642 aa8.65□□□□□ -1.02
LRP6-204ENST00000540415 EIF4E1BA6NMX2 242 aaKnown RBP8.64□□□□□ -1.03
LRP6-204ENST00000540415 CLDN3O15551 220 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 FAM189A1O60320 539 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 ADAM23O75077 832 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 CKMP06732 381 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 NFICP08651 508 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 CLTAP09496 248 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 MAPTP10636 758 aaKnown RBP8.64□□□□□ -1.03
LRP6-204ENST00000540415 TIE1P35590 1138 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 MATR3P43243 847 aaKnown RBP eCLIP8.64□□□□□ -1.03
LRP6-204ENST00000540415 GUCY1B3Q02153 619 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 FAM160A1Q05DH4 1040 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 PPP2R3AQ06190 1150 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 NBR1Q14596 966 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 SAFBQ15424 915 aaKnown RBP eCLIP8.64□□□□□ -1.03
LRP6-204ENST00000540415 TRIP6Q15654 476 aaKnown RBP8.64□□□□□ -1.03
LRP6-204ENST00000540415 SPATA1Q5VX52 437 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 PEAR1Q5VY43 1037 aaPredicted RBP8.64□□□□□ -1.03
LRP6-204ENST00000540415 C9orf57Q5W0N0 161 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 WSCD1Q658N2 575 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 JADE1Q6IE81 842 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 RINT1Q6NUQ1 792 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 C1orf186Q6ZWK4 172 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 C12orf40Q86WS4 652 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 ARL14EPQ8N8R7 260 aaPredicted RBP8.64□□□□□ -1.03
LRP6-204ENST00000540415 ADAMTS14Q8WXS8 1223 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 MRPS31Q92665 395 aaKnown RBP8.64□□□□□ -1.03
LRP6-204ENST00000540415 ATP2A3Q93084 1043 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 FAM212AQ96EL1 285 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 PLEKHA5Q9HAU0 1116 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 BCCIPQ9P287 314 aaKnown RBP eCLIP8.64□□□□□ -1.03
LRP6-204ENST00000540415 NUP205Q92621 2012 aa8.64□□□□□ -1.03
LRP6-204ENST00000540415 ZNF462Q96JM2 2506 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 NPHP3-ACAD11A0A0J9YXS1 232 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 TCRBV21S2A2A0A5A6 115 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 PIRO00625 290 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 CYB561D2O14569 222 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 HCRTO43612 131 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 GJB3O75712 270 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 CYP17A1P05093 508 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 CYP11A1P05108 521 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 SERPINF2P08697 491 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 CYP2F1P24903 491 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 DDX6P26196 483 aaKnown RBP eCLIP8.63□□□□□ -1.03
LRP6-204ENST00000540415 CDC25AP30304 524 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 GFPT1Q06210 699 aaPredicted RBP8.63□□□□□ -1.03
LRP6-204ENST00000540415 DUOXA1Q1HG43 343 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 SCARA3Q6AZY7 606 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 SLC41A1Q8IVJ1 513 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 C4orf32Q8N8J7 132 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 NSUN7Q8NE18 718 aaKnown RBP8.63□□□□□ -1.03
LRP6-204ENST00000540415 GLIS3Q8NEA6 775 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 SPPL2BQ8TCT7 592 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 SNX29Q8TEQ0 813 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 WHAMMQ8TF30 809 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 SPACA7Q96KW9 195 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 PYM1Q9BRP8 204 aaKnown RBP8.63□□□□□ -1.03
LRP6-204ENST00000540415 TM6SF1Q9BZW5 370 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 CD93Q9NPY3 652 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 GCNT4Q9P109 453 aa8.63□□□□□ -1.03
LRP6-204ENST00000540415 RBM19Q9Y4C8 960 aaKnown RBP8.63□□□□□ -1.03
LRP6-204ENST00000540415 THADAQ6YHU6 1953 aa8.62□□□□□ -1.03
LRP6-204ENST00000540415 PCNX2A6NKB5 2137 aa8.62□□□□□ -1.03
LRP6-204ENST00000540415 TSC2P49815 1807 aa8.62□□□□□ -1.03
LRP6-204ENST00000540415 KIAA1549LQ6ZVL6 1849 aa8.62□□□□□ -1.03
LRP6-204ENST00000540415 TRAV19A0A0A6YYK7 116 aa8.62□□□□□ -1.03
LRP6-204ENST00000540415 ANO9A1A5B4 782 aa8.62□□□□□ -1.03
LRP6-204ENST00000540415 ARHGAP33O14559 1287 aa8.62□□□□□ -1.03
LRP6-204ENST00000540415 PRPF40AO75400 957 aaKnown RBP8.62□□□□□ -1.03
LRP6-204ENST00000540415 ALDH1A2O94788 518 aa8.62□□□□□ -1.03
LRP6-204ENST00000540415 NOL4O94818 638 aa8.62□□□□□ -1.03
LRP6-204ENST00000540415 USP17L7P0C7H9 530 aa8.62□□□□□ -1.03
LRP6-204ENST00000540415 ACAT1P24752 427 aaKnown RBP8.62□□□□□ -1.03
LRP6-204ENST00000540415 RDXP35241 583 aaKnown RBP8.62□□□□□ -1.03
LRP6-204ENST00000540415 RPL6Q02878 288 aaKnown RBP8.62□□□□□ -1.03
LRP6-204ENST00000540415 KDSRQ06136 332 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms