RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 FAM9CQ8IZT9 166 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 B4GALNT2Q8NHY0 566 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 FAM162AQ96A26 154 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 CDK5RAP1Q96SZ6 601 aaKnown RBP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 THTPAQ9BU02 230 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 TARS2Q9BW92 718 aaKnown RBP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 TMEM39BQ9GZU3 492 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 NAGPAQ9UK23 515 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 A0A0A6YYK5 440 aaPredicted RBP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 AKAP10O43572 662 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 RHOBTB1O94844 696 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 SUPT20HL2P0C7V6 817 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 CYP2B6P20813 491 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 ILF2Q12905 390 aaKnown RBP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 TMEM132BQ14DG7 1078 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 GNASQ5JWF2 1037 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 PCNX4Q63HM2 1172 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 PHF21AQ96BD5 680 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 TADA1Q96BN2 335 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 AGBL1Q96MI9 1066 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 SRPK1Q96SB4 655 aaKnown RBP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 TRMT6Q9UJA5 497 aaKnown RBP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 SLC25A13Q9UJS0 675 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 FAM205CA6NFA0 338 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 VWA5AO00534 786 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 CAP2P40123 477 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 ALDH7A1P49419 539 aaKnown RBP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 KCNK10P57789 538 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 ANTXR2P58335 489 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 RPS6P62753 249 aaKnown RBP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 TP53BP2Q13625 1128 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 SKIV2LQ15477 1246 aaKnown RBP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 KBTBD12Q3ZCT8 623 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 MPZL3Q6UWV2 235 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 XPO6Q96QU8 1125 aaKnown RBP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 ALG13Q9NP73 1137 aaKnown RBP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 UPP2O95045 317 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 F9P00740 461 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 LHX1P48742 406 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 CTCFP49711 727 aaPredicted RBP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 KLK7P49862 253 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 PRPF39Q86UA1 669 aaKnown RBP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 GMCL1P1Q8NEA9 526 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 E2F7Q96AV8 911 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 NSL1Q96IY1 281 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 GLT1D1Q96MS3 346 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 TAAR1Q96RJ0 339 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 PI4K2AQ9BTU6 479 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 SMARCAL1Q9NZC9 954 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 CEMIPQ8WUJ3 1361 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 ADGRA2Q96PE1 1338 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 NKRFO15226 690 aaKnown RBP eCLIP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 RFX5P48382 616 aaPredicted RBP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 BCAT1P54687 386 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 KLC1Q07866 573 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 ACBD5Q5T8D3 534 aaPredicted RBP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 PPP4R4Q6NUP7 873 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 ADCK2Q7Z695 626 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 RBBP8Q99708 897 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 YIPF2Q9BWQ6 316 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 CYP3A43Q9HB55 503 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 ADARB2Q9NS39 739 aaKnown RBP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 MROH2AA6NES4 1674 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 MSH4O15457 936 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 GLRA3O75311 464 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 GRAP2O75791 330 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 KPNA1P52294 538 aaPredicted RBP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 RAP1GDS1P52306 607 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 NCALDP61601 193 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 MYBPC2Q14324 1141 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 SMTNL2Q2TAL5 461 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 RABGAP1LQ5R372 815 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 MRNIPQ6NTE8 343 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 ARMC6Q6NXE6 501 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 CHSY1Q86X52 802 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 ZNF507Q8TCN5 953 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 OSBPL1AQ9BXW6 950 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 FAM49BQ9NUQ9 324 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 RSPH10B2B2RC85 870 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 M0QYT0 321 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 RSPH10BP0C881 870 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 HS6ST3Q8IZP7 471 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 PGBD3Q8N328 593 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 SLC25A41Q8N5S1 370 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 DNERQ8NFT8 737 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 HES6Q96HZ4 224 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 SH2D3AQ9BRG2 576 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 ADNPQ9H2P0 1102 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 SCUBE2Q9NQ36 999 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 GTF3C4Q9UKN8 822 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 HPS5Q9UPZ3 1129 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 TIMM44O43615 452 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 CCND1P24385 295 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 HPCAP84074 193 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 KYNUQ16719 465 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 INTS5Q6P9B9 1019 aaKnown RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 RAD9BQ6WBX8 426 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 C3orf20Q8ND61 904 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 SEPT8Q92599 483 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms