RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 PTPN11Q06124 597 aaPredicted RBP26.2■■□□□ 1.79
RAB40C-204ENST00000538492 TMED2Q15363 201 aa26.2■■□□□ 1.79
RAB40C-204ENST00000538492 XYLT1Q86Y38 959 aa26.2■■□□□ 1.79
RAB40C-204ENST00000538492 LGALS13Q9UHV8 139 aa26.2■■□□□ 1.79
RAB40C-204ENST00000538492 GOLGA8MH3BSY2 632 aa26.2■■□□□ 1.78
RAB40C-204ENST00000538492 ARHGAP1Q07960 439 aa26.2■■□□□ 1.78
RAB40C-204ENST00000538492 POLNQ7Z5Q5 900 aa26.2■■□□□ 1.78
RAB40C-204ENST00000538492 NKD2Q969F2 451 aaPredicted RBP26.2■■□□□ 1.78
RAB40C-204ENST00000538492 CST8O60676 142 aa26.19■■□□□ 1.78
RAB40C-204ENST00000538492 LGALS2P05162 132 aa26.19■■□□□ 1.78
RAB40C-204ENST00000538492 ITGAVP06756 1048 aa26.19■■□□□ 1.78
RAB40C-204ENST00000538492 HNRNPH1P31943 449 aaKnown RBP26.19■■□□□ 1.78
RAB40C-204ENST00000538492 OTUD4Q01804 1114 aaKnown RBP26.19■■□□□ 1.78
RAB40C-204ENST00000538492 CCDC125Q86Z20 511 aa26.19■■□□□ 1.78
RAB40C-204ENST00000538492 TAB3Q8N5C8 712 aaPredicted RBP26.19■■□□□ 1.78
RAB40C-204ENST00000538492 ACTL9Q8TC94 416 aa26.19■■□□□ 1.78
RAB40C-204ENST00000538492 PDZD7Q9H5P4 517 aa26.19■■□□□ 1.78
RAB40C-204ENST00000538492 ACTR5Q9H9F9 607 aaPredicted RBP26.19■■□□□ 1.78
RAB40C-204ENST00000538492 FGFR1OP2Q9NVK5 253 aa26.19■■□□□ 1.78
RAB40C-204ENST00000538492 EXOC1LA0A1B0GW35 172 aa26.19■■□□□ 1.78
RAB40C-204ENST00000538492 ZNF286BP0CG31 522 aa26.19■■□□□ 1.78
RAB40C-204ENST00000538492 AMHR2Q16671 573 aa26.19■■□□□ 1.78
RAB40C-204ENST00000538492 CFAP57Q96MR6 1250 aa26.19■■□□□ 1.78
RAB40C-204ENST00000538492 FOXP3Q9BZS1 431 aa26.19■■□□□ 1.78
RAB40C-204ENST00000538492 M0QYV0 167 aa26.18■■□□□ 1.78
RAB40C-204ENST00000538492 PIK3R2O00459 728 aa26.18■■□□□ 1.78
RAB40C-204ENST00000538492 MICAL2O94851 1124 aa26.18■■□□□ 1.78
RAB40C-204ENST00000538492 SCTRP47872 440 aa26.18■■□□□ 1.78
RAB40C-204ENST00000538492 GDF10P55107 478 aa26.18■■□□□ 1.78
RAB40C-204ENST00000538492 TAF5Q15542 800 aa26.18■■□□□ 1.78
RAB40C-204ENST00000538492 RNASEH2BQ5TBB1 312 aaKnown RBP26.18■■□□□ 1.78
RAB40C-204ENST00000538492 ZBED8Q8IZ13 594 aa26.18■■□□□ 1.78
RAB40C-204ENST00000538492 CXorf38Q8TB03 319 aa26.18■■□□□ 1.78
RAB40C-204ENST00000538492 SLC35B2Q8TB61 432 aa26.18■■□□□ 1.78
RAB40C-204ENST00000538492 TMEM176AQ96HP8 235 aa26.18■■□□□ 1.78
RAB40C-204ENST00000538492 NSRP1Q9H0G5 558 aaKnown RBP26.18■■□□□ 1.78
RAB40C-204ENST00000538492 CCT8L1PA6NM43 557 aa26.18■■□□□ 1.78
RAB40C-204ENST00000538492 CILPO75339 1184 aa26.18■■□□□ 1.78
RAB40C-204ENST00000538492 BANF1O75531 89 aa26.18■■□□□ 1.78
RAB40C-204ENST00000538492 KRT7P08729 469 aa26.18■■□□□ 1.78
RAB40C-204ENST00000538492 HADHQ16836 314 aaKnown RBP26.18■■□□□ 1.78
RAB40C-204ENST00000538492 FASTKD5Q7L8L6 764 aaKnown RBP26.18■■□□□ 1.78
RAB40C-204ENST00000538492 NFKBIZQ9BYH8 718 aa26.18■■□□□ 1.78
RAB40C-204ENST00000538492 RASA4BC9J798 803 aa26.17■■□□□ 1.78
RAB40C-204ENST00000538492 POC1B-GALNT4F8VUJ3 575 aa26.17■■□□□ 1.78
RAB40C-204ENST00000538492 RASA4O43374 803 aa26.17■■□□□ 1.78
RAB40C-204ENST00000538492 ARF4P18085 180 aaPredicted RBP26.17■■□□□ 1.78
RAB40C-204ENST00000538492 MORF4L2Q15014 288 aa26.17■■□□□ 1.78
RAB40C-204ENST00000538492 SLC10A6Q3KNW5 377 aa26.17■■□□□ 1.78
RAB40C-204ENST00000538492 NUGGCQ68CJ6 796 aa26.17■■□□□ 1.78
RAB40C-204ENST00000538492 UBA3Q8TBC4 463 aa26.17■■□□□ 1.78
RAB40C-204ENST00000538492 HEXIM2Q96MH2 286 aaKnown RBP26.17■■□□□ 1.78
RAB40C-204ENST00000538492 EURLQ9NYK6 297 aa26.17■■□□□ 1.78
RAB40C-204ENST00000538492 ASB14A6NK59 587 aa26.17■■□□□ 1.78
RAB40C-204ENST00000538492 MCF2P10911 925 aa26.17■■□□□ 1.78
RAB40C-204ENST00000538492 KDELR1P24390 212 aa26.17■■□□□ 1.78
RAB40C-204ENST00000538492 ZNF484Q5JVG2 852 aa26.17■■□□□ 1.78
RAB40C-204ENST00000538492 HSPH1Q92598 858 aa26.17■■□□□ 1.78
RAB40C-204ENST00000538492 MRRFQ96E11 262 aaKnown RBP26.17■■□□□ 1.78
RAB40C-204ENST00000538492 KDM4CQ9H3R0 1056 aa26.17■■□□□ 1.78
RAB40C-204ENST00000538492 VPS37BQ9H9H4 285 aa26.17■■□□□ 1.78
RAB40C-204ENST00000538492 PCDH9Q9HC56 1237 aa26.17■■□□□ 1.78
RAB40C-204ENST00000538492 AGAP1Q9UPQ3 857 aa26.17■■□□□ 1.78
RAB40C-204ENST00000538492 ABHD2P08910 425 aa26.16■■□□□ 1.78
RAB40C-204ENST00000538492 GCAP28676 217 aa26.16■■□□□ 1.78
RAB40C-204ENST00000538492 GAD2Q05329 585 aa26.16■■□□□ 1.78
RAB40C-204ENST00000538492 ITIH4Q14624 930 aa26.16■■□□□ 1.78
RAB40C-204ENST00000538492 CEP128Q6ZU80 1094 aa26.16■■□□□ 1.78
RAB40C-204ENST00000538492 HPDLQ96IR7 371 aa26.16■■□□□ 1.78
RAB40C-204ENST00000538492 LACTB2Q53H82 288 aaPredicted RBP26.16■■□□□ 1.78
RAB40C-204ENST00000538492 KCTD6Q8NC69 237 aa26.16■■□□□ 1.78
RAB40C-204ENST00000538492 FNIP1Q8TF40 1166 aa26.16■■□□□ 1.78
RAB40C-204ENST00000538492 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.16■■□□□ 1.78
RAB40C-204ENST00000538492 TNFAIP2Q03169 654 aa26.15■■□□□ 1.78
RAB40C-204ENST00000538492 MYO1EQ12965 1108 aa26.15■■□□□ 1.78
RAB40C-204ENST00000538492 PDIA2Q13087 525 aaKnown RBP26.15■■□□□ 1.78
RAB40C-204ENST00000538492 ZKSCAN8Q15776 578 aaPredicted RBP26.15■■□□□ 1.78
RAB40C-204ENST00000538492 MAP1SQ66K74 1059 aaPredicted RBP26.15■■□□□ 1.78
RAB40C-204ENST00000538492 ILDR2Q71H61 639 aa26.15■■□□□ 1.78
RAB40C-204ENST00000538492 ANKMY2Q8IV38 441 aa26.15■■□□□ 1.78
RAB40C-204ENST00000538492 AFG1LQ8WV93 481 aa26.15■■□□□ 1.78
RAB40C-204ENST00000538492 PRCCQ92733 491 aaPredicted RBP26.15■■□□□ 1.78
RAB40C-204ENST00000538492 SNX3O60493 162 aa26.15■■□□□ 1.78
RAB40C-204ENST00000538492 MIPP30301 263 aa26.15■■□□□ 1.78
RAB40C-204ENST00000538492 STX2P32856 288 aa26.15■■□□□ 1.78
RAB40C-204ENST00000538492 GJA5P36382 358 aa26.15■■□□□ 1.78
RAB40C-204ENST00000538492 MTM1Q13496 603 aa26.15■■□□□ 1.78
RAB40C-204ENST00000538492 TAPT1Q6NXT6 567 aa26.15■■□□□ 1.78
RAB40C-204ENST00000538492 CKAP2Q8WWK9 683 aa26.15■■□□□ 1.78
RAB40C-204ENST00000538492 NLRP7Q8WX94 980 aa26.15■■□□□ 1.78
RAB40C-204ENST00000538492 MAML1Q92585 1016 aa26.15■■□□□ 1.78
RAB40C-204ENST00000538492 ADAM33Q9BZ11 813 aa26.15■■□□□ 1.78
RAB40C-204ENST00000538492 WDR35Q9P2L0 1181 aa26.15■■□□□ 1.78
RAB40C-204ENST00000538492 GPD2P43304 727 aa26.14■■□□□ 1.78
RAB40C-204ENST00000538492 LAMC2Q13753 1193 aa26.14■■□□□ 1.78
RAB40C-204ENST00000538492 ZNF268Q14587 947 aaPredicted RBP26.14■■□□□ 1.78
RAB40C-204ENST00000538492 TMEM132DQ14C87 1099 aa26.14■■□□□ 1.78
RAB40C-204ENST00000538492 FAM187BQ17R55 369 aa26.14■■□□□ 1.78
RAB40C-204ENST00000538492 FAM102AQ5T9C2 384 aaPredicted RBP26.14■■□□□ 1.78
RAB40C-204ENST00000538492 TTC25Q96NG3 672 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms