RNA–Protein interactions for RNA: ENST00000537694.1

PPP1CA-209, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 882 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-209ENST00000537694 COL4A2P08572 1712 aa16.44■□□□□ 0.22
PPP1CA-209ENST00000537694 TRDMT1O14717 391 aaKnown RBP16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 IL18RAPO95256 599 aa16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 CSH1P0DML2 217 aa16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 CSH2P0DML3 217 aa16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 ARSAP15289 507 aa16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 DDX6P26196 483 aaKnown RBP eCLIP16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 GPR15P49685 360 aa16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 BECN1Q14457 450 aa16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 NFE2Q16621 373 aaPredicted RBP16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 DDR2Q16832 855 aa16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 KBTBD6Q86V97 674 aa16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 MON1AQ86VX9 555 aa16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 EFCAB13Q8IY85 973 aa16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 STKLD1Q8NE28 680 aa16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 DDX1Q92499 740 aaKnown RBP16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 DHX58Q96C10 678 aa16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 DNAJC19Q96DA6 116 aa16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 FAM213AQ9BRX8 229 aa16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 FBRSL1Q9HCM7 1045 aaKnown RBP16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 POLR3BQ9NW08 1133 aaPredicted RBP16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 ATP6V1DQ9Y5K8 247 aa16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 SCN1AP35498 2009 aa16.43■□□□□ 0.22
PPP1CA-209ENST00000537694 A0A087X0B3 334 aa16.42■□□□□ 0.22
PPP1CA-209ENST00000537694 HUS1O60921 280 aa16.42■□□□□ 0.22
PPP1CA-209ENST00000537694 RNF40O75150 1001 aa16.42■□□□□ 0.22
PPP1CA-209ENST00000537694 EGFP01133 1207 aa16.42■□□□□ 0.22
PPP1CA-209ENST00000537694 ZNF806P0C7X5 589 aa16.42■□□□□ 0.22
PPP1CA-209ENST00000537694 CYP2F1P24903 491 aa16.42■□□□□ 0.22
PPP1CA-209ENST00000537694 ADSSP30520 456 aa16.42■□□□□ 0.22
PPP1CA-209ENST00000537694 POU5F1Q01860 360 aaKnown RBP16.42■□□□□ 0.22
PPP1CA-209ENST00000537694 CSGALNACT2Q8N6G5 542 aa16.42■□□□□ 0.22
PPP1CA-209ENST00000537694 NOC3LQ8WTT2 800 aaKnown RBP16.42■□□□□ 0.22
PPP1CA-209ENST00000537694 CACTINQ8WUQ7 758 aaKnown RBP16.42■□□□□ 0.22
PPP1CA-209ENST00000537694 LOXL4Q96JB6 756 aa16.42■□□□□ 0.22
PPP1CA-209ENST00000537694 CYP2S1Q96SQ9 504 aa16.42■□□□□ 0.22
PPP1CA-209ENST00000537694 MAGEF1Q9HAY2 307 aa16.42■□□□□ 0.22
PPP1CA-209ENST00000537694 OLFML3Q9NRN5 406 aa16.42■□□□□ 0.22
PPP1CA-209ENST00000537694 CCDC163A0A0D9SF12 145 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 ITGB3P05106 788 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 DRD1P21728 446 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 ACAT1P24752 427 aaKnown RBP16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 POLR2BP30876 1174 aaKnown RBP16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 PNPLA4P41247 253 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 RPL10AP62906 217 aaKnown RBP16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 ASIC1P78348 528 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 DNM1Q05193 864 aaKnown RBP16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 KCNA1Q09470 495 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 PSMD2Q13200 908 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 PDGFRLQ15198 375 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 L1TD1Q5T7N2 865 aaKnown RBP16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 SHC4Q6S5L8 630 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 NT5DC4Q86YG4 428 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 PDCL2Q8N4E4 241 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 CAMKK1Q8N5S9 505 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 EXOC4Q96A65 974 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 CHFRQ96EP1 664 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 SAAL1Q96ER3 474 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 ZNF560Q96MR9 790 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 P2RY13Q9BPV8 354 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 ACBD6Q9BR61 282 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 TMEM206Q9H813 350 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 KIF9Q9HAQ2 790 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 TRPC7Q9HCX4 862 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 DDX43Q9NXZ2 648 aaKnown RBP16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 GTF3C4Q9UKN8 822 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 PCDHA7Q9UN72 937 aa16.41■□□□□ 0.22
PPP1CA-209ENST00000537694 SOBPA7XYQ1 873 aa16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 POLR2DO15514 142 aaKnown RBP16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 LDHAP00338 332 aaKnown RBP16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 KRT19P08727 400 aa16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 GJA4P35212 333 aa16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 RAP1GAPP47736 663 aa16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 KRT85P78386 507 aa16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 MYL7Q01449 175 aa16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 PKP1Q13835 747 aa16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 ST3GAL2Q16842 350 aa16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 CEP57L1Q8IYX8 460 aa16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 ZSWIM2Q8NEG5 633 aa16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 RXFP3Q9NSD7 469 aa16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 KBTBD4Q9NVX7 518 aa16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 DUS2Q9NX74 493 aaKnown RBP16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 UXTQ9UBK9 157 aaPredicted RBP16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 RCOR1Q9UKL0 485 aa16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 R3HCC1Q9Y3T6 440 aaKnown RBP16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 MAP1BP46821 2468 aaKnown RBP16.4■□□□□ 0.22
PPP1CA-209ENST00000537694 ANK1P16157 1881 aa16.39■□□□□ 0.22
PPP1CA-209ENST00000537694 FRMD3A2A2Y4 597 aa16.39■□□□□ 0.21
PPP1CA-209ENST00000537694 GOLGA8IPA6NC78 632 aa16.39■□□□□ 0.21
PPP1CA-209ENST00000537694 GOLGA8JA6NMD2 632 aa16.39■□□□□ 0.21
PPP1CA-209ENST00000537694 PPP1R37O75864 691 aa16.39■□□□□ 0.21
PPP1CA-209ENST00000537694 E2F4Q16254 413 aa16.39■□□□□ 0.21
PPP1CA-209ENST00000537694 NAIF1Q69YI7 327 aaPredicted RBP16.39■□□□□ 0.21
PPP1CA-209ENST00000537694 SCARA3Q6AZY7 606 aa16.39■□□□□ 0.21
PPP1CA-209ENST00000537694 SPATA2LQ8IUW3 424 aaPredicted RBP16.39■□□□□ 0.21
PPP1CA-209ENST00000537694 SCN4BQ8IWT1 228 aa16.39■□□□□ 0.21
PPP1CA-209ENST00000537694 CPA6Q8N4T0 437 aa16.39■□□□□ 0.21
PPP1CA-209ENST00000537694 C1orf127Q8N9H9 656 aa16.39■□□□□ 0.21
PPP1CA-209ENST00000537694 SPATA32Q96LK8 384 aa16.39■□□□□ 0.21
PPP1CA-209ENST00000537694 HHIPQ96QV1 700 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms