RNA–Protein interactions for RNA: ENST00000537315.5

RFC5-208, Transcript of replication factor C subunit 5, humanhuman

TSL 4

Gene RFC5, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-208ENST00000537315 HMGA1P17096 107 aaKnown RBP12.87□□□□□ -0.35
RFC5-208ENST00000537315 WARSP23381 471 aaKnown RBP12.87□□□□□ -0.35
RFC5-208ENST00000537315 PCSK1P29120 753 aa12.87□□□□□ -0.35
RFC5-208ENST00000537315 CDC25CP30307 473 aa12.87□□□□□ -0.35
RFC5-208ENST00000537315 LHX1P48742 406 aa12.87□□□□□ -0.35
RFC5-208ENST00000537315 TNNC1P63316 161 aa12.87□□□□□ -0.35
RFC5-208ENST00000537315 PSMD2Q13200 908 aa12.87□□□□□ -0.35
RFC5-208ENST00000537315 TRPC3Q13507 836 aa12.87□□□□□ -0.35
RFC5-208ENST00000537315 MDH1BQ5I0G3 518 aa12.87□□□□□ -0.35
RFC5-208ENST00000537315 CEP135Q66GS9 1140 aa12.87□□□□□ -0.35
RFC5-208ENST00000537315 FRMD5Q7Z6J6 570 aa12.87□□□□□ -0.35
RFC5-208ENST00000537315 ARID3BQ8IVW6 561 aaPredicted RBP12.87□□□□□ -0.35
RFC5-208ENST00000537315 SMYD4Q8IYR2 804 aaPredicted RBP12.87□□□□□ -0.35
RFC5-208ENST00000537315 TTC8Q8TAM2 541 aa12.87□□□□□ -0.35
RFC5-208ENST00000537315 DEPDC1BQ8WUY9 529 aa12.87□□□□□ -0.35
RFC5-208ENST00000537315 DNASE1L2Q92874 299 aa12.87□□□□□ -0.35
RFC5-208ENST00000537315 SHDQ96IW2 340 aa12.87□□□□□ -0.35
RFC5-208ENST00000537315 LRRC3BQ96PB8 259 aa12.87□□□□□ -0.35
RFC5-208ENST00000537315 DPEP3Q9H4B8 488 aa12.87□□□□□ -0.35
RFC5-208ENST00000537315 NXF1Q9UBU9 619 aaKnown RBP12.87□□□□□ -0.35
RFC5-208ENST00000537315 NDRG2Q9UN36 371 aaKnown RBP12.87□□□□□ -0.35
RFC5-208ENST00000537315 FAM170BA6NMN3 283 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 SLC38A8A6NNN8 435 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 ARNTLO00327 626 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 ZNF263O14978 683 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 RHOBTB3O94955 611 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 SOX9P48436 509 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 NLRP12P59046 1061 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 CYP27A1Q02318 531 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 PNOCQ13519 176 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 ZNF699Q32M78 642 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 WDR72Q3MJ13 1102 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 MFSD6LQ8IWD5 586 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 YAF2Q8IY57 180 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 OR6B3Q8NGW1 331 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 SPATA18Q8TC71 538 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 PARD3BQ8TEW8 1205 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 GPR88Q9GZN0 384 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 XYLT2Q9H1B5 865 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 SNX25Q9H3E2 840 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 TASP1Q9H6P5 420 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 ABCB6Q9NP58 842 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.86□□□□□ -0.353e-11■■■■■ 99.4
RFC5-208ENST00000537315 DMAC2Q9NW81 257 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 CDH9Q9ULB4 789 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 CCL26Q9Y258 94 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 PIAS3Q9Y6X2 628 aa12.86□□□□□ -0.35
RFC5-208ENST00000537315 EML5Q05BV3 1969 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 PDXKO00764 312 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 DPYSL4O14531 572 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 CALUO43852 315 aaPredicted RBP12.85□□□□□ -0.35
RFC5-208ENST00000537315 NOL4O94818 638 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 VNN1O95497 513 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 F11P03951 625 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 TRIM49P0CI25 452 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 TRIM49CP0CI26 452 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 CSH1P0DML2 217 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 CSH2P0DML3 217 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 BDNFP23560 247 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 RPL10AP62906 217 aaKnown RBP12.85□□□□□ -0.35
RFC5-208ENST00000537315 NCOA4Q13772 614 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 CFAP221Q4G0U5 840 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 TXNDC8Q6A555 127 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 FAM171BQ6P995 826 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 C4orf50Q6ZRC1 276 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 DPH6Q7L8W6 267 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 SLC9A9Q8IVB4 645 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 MAB21L3Q8N8X9 362 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 RIN3Q8TB24 985 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 ERCC4Q92889 916 aaPredicted RBP12.85□□□□□ -0.35
RFC5-208ENST00000537315 IRF7Q92985 503 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 CCDC47Q96A33 483 aaKnown RBP12.85□□□□□ -0.35
RFC5-208ENST00000537315 SYAP1Q96A49 352 aaPredicted RBP12.85□□□□□ -0.35
RFC5-208ENST00000537315 PCED1BQ96HM7 432 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 SLC46A2Q9BY10 475 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 SDCBP2Q9H190 292 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 TRPC7Q9HCX4 862 aa12.85□□□□□ -0.35
RFC5-208ENST00000537315 GFRA3O60609 400 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 TACC1O75410 805 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 AKAP3O75969 853 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 NR2F2P24468 414 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 NBL1P41271 181 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 PIK3CAP42336 1068 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 CACNA2D1P54289 1103 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 CDH8P55286 799 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 TNK2Q07912 1038 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 FCHO2Q0JRZ9 810 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 ORC1Q13415 861 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 C1orf220Q5T0J3 134 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 SPOPLQ6IQ16 392 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 ZNF852Q6ZMS4 543 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 ASCL5Q7RTU5 278 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 CMTM8Q8IZV2 173 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 FMR1NBQ8N0W7 255 aaPredicted RBP12.84□□□□□ -0.35
RFC5-208ENST00000537315 TTC16Q8NEE8 873 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 CSGALNACT1Q8TDX6 532 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 FUBP3Q96I24 572 aaKnown RBP eCLIP12.84□□□□□ -0.35
RFC5-208ENST00000537315 BCO2Q9BYV7 579 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 ZNF518BQ9C0D4 1074 aa12.84□□□□□ -0.35
RFC5-208ENST00000537315 IRF2BPLQ9H1B7 796 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms