RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 ADRM1Q16186 407 aa11.07□□□□□ -0.64
CLIP1-209ENST00000537178 ADSSL1Q8N142 457 aa11.07□□□□□ -0.64
CLIP1-209ENST00000537178 CAAP1Q9H8G2 361 aa11.07□□□□□ -0.64
CLIP1-209ENST00000537178 NFKBIL1Q9UBC1 381 aaPredicted RBP11.07□□□□□ -0.64
CLIP1-209ENST00000537178 LAMB4A4D0S4 1761 aa11.07□□□□□ -0.64
CLIP1-209ENST00000537178 ARFGEF2Q9Y6D5 1785 aa11.07□□□□□ -0.64
CLIP1-209ENST00000537178 TRPM3Q9HCF6 1732 aaPredicted RBP11.07□□□□□ -0.64
CLIP1-209ENST00000537178 KANSL1LA0AUZ9 987 aa11.07□□□□□ -0.64
CLIP1-209ENST00000537178 TBX3O15119 743 aa11.07□□□□□ -0.64
CLIP1-209ENST00000537178 PTPN7P35236 360 aa11.07□□□□□ -0.64
CLIP1-209ENST00000537178 PTGER2P43116 358 aa11.07□□□□□ -0.64
CLIP1-209ENST00000537178 COPAP53621 1224 aa11.07□□□□□ -0.64
CLIP1-209ENST00000537178 RPS6P62753 249 aaKnown RBP11.07□□□□□ -0.64
CLIP1-209ENST00000537178 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.07□□□□□ -0.64
CLIP1-209ENST00000537178 PRPF39Q86UA1 669 aaKnown RBP11.07□□□□□ -0.64
CLIP1-209ENST00000537178 CCDC103Q8IW40 242 aa11.07□□□□□ -0.64
CLIP1-209ENST00000537178 FAM9CQ8IZT9 166 aa11.07□□□□□ -0.64
CLIP1-209ENST00000537178 DDHD1Q8NEL9 900 aa11.07□□□□□ -0.64
CLIP1-209ENST00000537178 DDI1Q8WTU0 396 aa11.07□□□□□ -0.64
CLIP1-209ENST00000537178 OTUD5Q96G74 571 aa11.07□□□□□ -0.64
CLIP1-209ENST00000537178 MANSC1Q9H8J5 431 aa11.07□□□□□ -0.64
CLIP1-209ENST00000537178 ANKARQ7Z5J8 1434 aa11.07□□□□□ -0.64
CLIP1-209ENST00000537178 CCDC81Q6ZN84 652 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 RASGRP2Q7LDG7 609 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 APLFQ8IW19 511 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-209ENST00000537178 ZNF669Q96BR6 464 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-209ENST00000537178 C19orf60Q96EN9 201 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 RGPD5Q99666 1765 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 ADGRA2Q96PE1 1338 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 CDHR2Q9BYE9 1310 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 RHOBTB1O94844 696 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 IL18RAPO95256 599 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 TMEM253P0C7T8 217 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 PSMA4P25789 261 aaKnown RBP11.06□□□□□ -0.64
CLIP1-209ENST00000537178 CENPAP49450 140 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 ATXN3P54252 364 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-209ENST00000537178 SGO1Q5FBB7 561 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 EFHC1Q5JVL4 640 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 SYCP2LQ5T4T6 812 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 FBXW10Q5XX13 1052 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 UGT3A1Q6NUS8 523 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 LINC00523Q86TU6 105 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 IPMKQ8NFU5 416 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 FAR2Q96K12 515 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 FHOD1Q9Y613 1164 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 CST8O60676 142 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 ACOT2P49753 483 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 SLC16A1P53985 500 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 CNTN1Q12860 1018 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 PCSK7Q16549 785 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 SNRNP35Q16560 246 aaKnown RBP11.06□□□□□ -0.64
CLIP1-209ENST00000537178 USP39Q53GS9 565 aaKnown RBP11.06□□□□□ -0.64
CLIP1-209ENST00000537178 LAYNQ6UX15 382 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 MARCH10Q8NA82 808 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-209ENST00000537178 SEPT1Q8WYJ6 367 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 CHP1Q99653 195 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 LBHD1Q9BQE6 289 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-209ENST00000537178 GINS4Q9BRT9 223 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 ERP44Q9BS26 406 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 THUMPD3Q9BV44 507 aaKnown RBP11.06□□□□□ -0.64
CLIP1-209ENST00000537178 APOL5Q9BWW9 433 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 ZNF446Q9NWS9 450 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 DLGAP2Q9P1A6 1054 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 RGS5O15539 181 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 ANXA9O76027 345 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 HMBSP08397 361 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 ADRA2BP18089 450 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 NUP62P37198 522 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-209ENST00000537178 BTKQ06187 659 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 ZNF677Q86XU0 584 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 OR6J1Q8NGC5 347 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 SLC7A14Q8TBB6 771 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 MS4A14Q96JA4 679 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 C7orf25Q9BPX7 421 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 KATNAL1Q9BW62 490 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 UBXN6Q9BZV1 441 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 ILKAPQ9H0C8 392 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-209ENST00000537178 EPS8L2Q9H6S3 715 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 CTNNAL1Q9UBT7 734 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 EIF3LQ9Y262 564 aaKnown RBP11.06□□□□□ -0.64
CLIP1-209ENST00000537178 SESN1Q9Y6P5 492 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 OVOS2A0A0G2JMS6 1433 aa11.06□□□□□ -0.64
CLIP1-209ENST00000537178 GSG1L2A8MUP6 293 aa11.05□□□□□ -0.64
CLIP1-209ENST00000537178 VWA5AO00534 786 aa11.05□□□□□ -0.64
CLIP1-209ENST00000537178 ZNF185O15231 689 aa11.05□□□□□ -0.64
CLIP1-209ENST00000537178 STX7O15400 261 aaKnown RBP11.05□□□□□ -0.64
CLIP1-209ENST00000537178 ALDH1A2O94788 518 aa11.05□□□□□ -0.64
CLIP1-209ENST00000537178 CACHD1Q5VU97 1274 aa11.05□□□□□ -0.64
CLIP1-209ENST00000537178 HS6ST3Q8IZP7 471 aa11.05□□□□□ -0.64
CLIP1-209ENST00000537178 C3orf20Q8ND61 904 aa11.05□□□□□ -0.64
CLIP1-209ENST00000537178 DEPDC7Q96QD5 511 aa11.05□□□□□ -0.64
CLIP1-209ENST00000537178 TEX13BQ9BXU2 312 aa11.05□□□□□ -0.64
CLIP1-209ENST00000537178 IL1RL2Q9HB29 575 aa11.05□□□□□ -0.64
CLIP1-209ENST00000537178 CRLS1Q9UJA2 301 aa11.05□□□□□ -0.64
CLIP1-209ENST00000537178 SLC39A10Q9ULF5 831 aa11.05□□□□□ -0.64
CLIP1-209ENST00000537178 SH3BP1Q9Y3L3 701 aa11.05□□□□□ -0.64
CLIP1-209ENST00000537178 H2AFYO75367 372 aaKnown RBP11.05□□□□□ -0.64
CLIP1-209ENST00000537178 SNRPFP62306 86 aaKnown RBP11.05□□□□□ -0.64
CLIP1-209ENST00000537178 C16orf72Q14CZ0 275 aa11.05□□□□□ -0.64
CLIP1-209ENST00000537178 IER5Q5VY09 327 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms