RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 ADAMTS3O15072 1205 aa6.59□□□□□ -1.35
CCDC7-208ENST00000537047 KCNAB3O43448 404 aa6.59□□□□□ -1.35
CCDC7-208ENST00000537047 PDE8BO95263 885 aa6.59□□□□□ -1.35
CCDC7-208ENST00000537047 ARIH2O95376 493 aa6.59□□□□□ -1.35
CCDC7-208ENST00000537047 CCND1P24385 295 aa6.59□□□□□ -1.35
CCDC7-208ENST00000537047 LONRF3Q496Y0 759 aa6.59□□□□□ -1.35
CCDC7-208ENST00000537047 CATSPERGQ6ZRH7 1159 aa6.59□□□□□ -1.35
CCDC7-208ENST00000537047 NELL2Q99435 816 aa6.59□□□□□ -1.35
CCDC7-208ENST00000537047 TBC1D30Q9Y2I9 924 aa6.59□□□□□ -1.35
CCDC7-208ENST00000537047 MYO1FO00160 1098 aa6.58□□□□□ -1.36
CCDC7-208ENST00000537047 PPEF2O14830 753 aa6.58□□□□□ -1.36
CCDC7-208ENST00000537047 TLR5O60602 858 aa6.58□□□□□ -1.36
CCDC7-208ENST00000537047 UNC5CO95185 931 aa6.58□□□□□ -1.36
CCDC7-208ENST00000537047 PLS1Q14651 629 aa6.58□□□□□ -1.36
CCDC7-208ENST00000537047 RGS7BPQ6MZT1 257 aaPredicted RBP6.58□□□□□ -1.36
CCDC7-208ENST00000537047 USP45Q70EL2 814 aa6.58□□□□□ -1.36
CCDC7-208ENST00000537047 WDR53Q7Z5U6 358 aaPredicted RBP6.58□□□□□ -1.36
CCDC7-208ENST00000537047 RITA1Q96K30 269 aa6.58□□□□□ -1.36
CCDC7-208ENST00000537047 ASPSCR1Q9BZE9 553 aa6.58□□□□□ -1.36
CCDC7-208ENST00000537047 TMX1Q9H3N1 280 aa6.58□□□□□ -1.36
CCDC7-208ENST00000537047 PNPOQ9NVS9 261 aa6.58□□□□□ -1.36
CCDC7-208ENST00000537047 ADAMTS5Q9UNA0 930 aa6.58□□□□□ -1.36
CCDC7-208ENST00000537047 SBNO2Q9Y2G9 1366 aa6.57□□□□□ -1.36
CCDC7-208ENST00000537047 A1L4Q6 167 aa6.57□□□□□ -1.36
CCDC7-208ENST00000537047 hCG_1984214I3L0E3 225 aa6.57□□□□□ -1.36
CCDC7-208ENST00000537047 SLC16A6O15403 523 aa6.57□□□□□ -1.36
CCDC7-208ENST00000537047 NTN1O95631 604 aa6.57□□□□□ -1.36
CCDC7-208ENST00000537047 PXNP49023 591 aaPredicted RBP6.57□□□□□ -1.36
CCDC7-208ENST00000537047 HOXA4Q00056 320 aaPredicted RBP6.57□□□□□ -1.36
CCDC7-208ENST00000537047 THEMIS2Q5TEJ8 643 aa6.57□□□□□ -1.36
CCDC7-208ENST00000537047 FCRL6Q6DN72 434 aa6.57□□□□□ -1.36
CCDC7-208ENST00000537047 TECPR1Q7Z6L1 1165 aa6.57□□□□□ -1.36
CCDC7-208ENST00000537047 CNGA4Q8IV77 575 aa6.57□□□□□ -1.36
CCDC7-208ENST00000537047 C8orf58Q8NAV2 365 aa6.57□□□□□ -1.36
CCDC7-208ENST00000537047 DDX17Q92841 729 aaKnown RBP6.57□□□□□ -1.36
CCDC7-208ENST00000537047 FSD1LQ9BXM9 530 aa6.57□□□□□ -1.36
CCDC7-208ENST00000537047 PRSS22Q9GZN4 317 aa6.57□□□□□ -1.36
CCDC7-208ENST00000537047 MRPS17Q9Y2R5 130 aaKnown RBP6.57□□□□□ -1.36
CCDC7-208ENST00000537047 H3BUI4 141 aa6.56□□□□□ -1.36
CCDC7-208ENST00000537047 TRIM38O00635 465 aa6.56□□□□□ -1.36
CCDC7-208ENST00000537047 POU2F2P09086 479 aa6.56□□□□□ -1.36
CCDC7-208ENST00000537047 LOXL3P58215 753 aa6.56□□□□□ -1.36
CCDC7-208ENST00000537047 RABEP1Q15276 862 aa6.56□□□□□ -1.36
CCDC7-208ENST00000537047 SFRP4Q6FHJ7 346 aaPredicted RBP6.56□□□□□ -1.36
CCDC7-208ENST00000537047 LAYNQ6UX15 382 aa6.56□□□□□ -1.36
CCDC7-208ENST00000537047 ZNF804AQ7Z570 1209 aa6.56□□□□□ -1.36
CCDC7-208ENST00000537047 XAGE5Q8WWM1 108 aa6.56□□□□□ -1.36
CCDC7-208ENST00000537047 ASB2Q96Q27 587 aa6.56□□□□□ -1.36
CCDC7-208ENST00000537047 PTDSS2Q9BVG9 487 aa6.56□□□□□ -1.36
CCDC7-208ENST00000537047 GTPBP4Q9BZE4 634 aaKnown RBP6.56□□□□□ -1.36
CCDC7-208ENST00000537047 VPS16Q9H269 839 aa6.56□□□□□ -1.36
CCDC7-208ENST00000537047 GLOD4Q9HC38 313 aa6.56□□□□□ -1.36
CCDC7-208ENST00000537047 ANLNQ9NQW6 1124 aa6.56□□□□□ -1.36
CCDC7-208ENST00000537047 KLHL13Q9P2N7 655 aa6.56□□□□□ -1.36
CCDC7-208ENST00000537047 PCDHA6Q9UN73 950 aa6.56□□□□□ -1.36
CCDC7-208ENST00000537047 ERC2O15083 957 aa6.55□□□□□ -1.36
CCDC7-208ENST00000537047 ATXN1LP0C7T5 689 aaKnown RBP6.55□□□□□ -1.36
CCDC7-208ENST00000537047 NKX6-1P78426 367 aaPredicted RBP6.55□□□□□ -1.36
CCDC7-208ENST00000537047 DAZAP2Q15038 168 aaPredicted RBP6.55□□□□□ -1.36
CCDC7-208ENST00000537047 IQCB1Q15051 598 aa6.55□□□□□ -1.36
CCDC7-208ENST00000537047 AWAT2Q6E213 333 aa6.55□□□□□ -1.36
CCDC7-208ENST00000537047 Q6ZWC4 215 aa6.55□□□□□ -1.36
CCDC7-208ENST00000537047 GALNT16Q8N428 558 aa6.55□□□□□ -1.36
CCDC7-208ENST00000537047 NDRG4Q9ULP0 352 aaKnown RBP6.55□□□□□ -1.36
CCDC7-208ENST00000537047 ONECUT2O95948 504 aa6.54□□□□□ -1.36
CCDC7-208ENST00000537047 MMP13P45452 471 aa6.54□□□□□ -1.36
CCDC7-208ENST00000537047 RECQLP46063 649 aaPredicted RBP6.54□□□□□ -1.36
CCDC7-208ENST00000537047 SOX8P57073 446 aa6.54□□□□□ -1.36
CCDC7-208ENST00000537047 FHL1Q13642 323 aa6.54□□□□□ -1.36
CCDC7-208ENST00000537047 PGS1Q32NB8 556 aa6.54□□□□□ -1.36
CCDC7-208ENST00000537047 Q4G0T1 1027 aa6.54□□□□□ -1.36
CCDC7-208ENST00000537047 TRIM72Q6ZMU5 477 aa6.54□□□□□ -1.36
CCDC7-208ENST00000537047 PARS2Q7L3T8 475 aaKnown RBP6.54□□□□□ -1.36
CCDC7-208ENST00000537047 ZNF280BQ86YH2 543 aa6.54□□□□□ -1.36
CCDC7-208ENST00000537047 SLC35A4Q96G79 324 aa6.54□□□□□ -1.36
CCDC7-208ENST00000537047 LENG8Q96PV6 779 aaPredicted RBP6.54□□□□□ -1.36
CCDC7-208ENST00000537047 SH2B3Q9UQQ2 575 aa6.54□□□□□ -1.36
CCDC7-208ENST00000537047 DTNBO60941 627 aa6.53□□□□□ -1.36
CCDC7-208ENST00000537047 VNN1O95497 513 aa6.53□□□□□ -1.36
CCDC7-208ENST00000537047 GRPP07492 148 aa6.53□□□□□ -1.36
CCDC7-208ENST00000537047 NPSP0C0P6 89 aa6.53□□□□□ -1.36
CCDC7-208ENST00000537047 PPIFP30405 207 aaKnown RBP6.53□□□□□ -1.36
CCDC7-208ENST00000537047 NR4A2P43354 598 aa6.53□□□□□ -1.36
CCDC7-208ENST00000537047 RNF187Q5TA31 235 aaPredicted RBP6.53□□□□□ -1.36
CCDC7-208ENST00000537047 KIRREL2Q6UWL6 708 aa6.53□□□□□ -1.36
CCDC7-208ENST00000537047 ZC3H10Q96K80 434 aaKnown RBP6.53□□□□□ -1.36
CCDC7-208ENST00000537047 WACQ9BTA9 647 aa6.53□□□□□ -1.36
CCDC7-208ENST00000537047 CCNL1Q9UK58 526 aaPredicted RBP6.53□□□□□ -1.36
CCDC7-208ENST00000537047 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.53□□□□□ -1.36
CCDC7-208ENST00000537047 CYP2D7A0A087X1C5 515 aa6.52□□□□□ -1.37
CCDC7-208ENST00000537047 EXOC3O60645 756 aa6.52□□□□□ -1.37
CCDC7-208ENST00000537047 CSF1RP07333 972 aa6.52□□□□□ -1.37
CCDC7-208ENST00000537047 FPR3P25089 353 aa6.52□□□□□ -1.37
CCDC7-208ENST00000537047 ADORA2AP29274 412 aa6.52□□□□□ -1.37
CCDC7-208ENST00000537047 LY6KQ17RY6 165 aa6.52□□□□□ -1.37
CCDC7-208ENST00000537047 ZNF260Q3ZCT1 412 aa6.52□□□□□ -1.37
CCDC7-208ENST00000537047 KHDC1LQ5JSQ8 128 aa6.52□□□□□ -1.37
CCDC7-208ENST00000537047 DEPDC1Q5TB30 811 aa6.52□□□□□ -1.37
CCDC7-208ENST00000537047 EMC10Q5UCC4 262 aa6.52□□□□□ -1.37
CCDC7-208ENST00000537047 DPY19L3Q6ZPD9 716 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms