RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 CSPG5O95196 566 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 CYP1A1P04798 512 aaPredicted RBP12.21□□□□□ -0.45
CDCA3-206ENST00000536241 URODP06132 367 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 CTSAP10619 480 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 UNGP13051 313 aaPredicted RBP12.21□□□□□ -0.45
CDCA3-206ENST00000536241 OR1D2P34982 312 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 CA8P35219 290 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 SLC18A3Q16572 532 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 GOLGA7BQ2TAP0 167 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 SLC39A12Q504Y0 691 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 HS1BP3Q53T59 392 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 ALKBH5Q6P6C2 394 aaKnown RBP12.21□□□□□ -0.45
CDCA3-206ENST00000536241 TOGARAM2Q6ZUX3 1019 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 DCP1BQ8IZD4 617 aaKnown RBP12.21□□□□□ -0.45
CDCA3-206ENST00000536241 FUKQ8N0W3 1084 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 MICAL1Q8TDZ2 1067 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 CPA5Q8WXQ8 436 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 ZBP1Q9H171 429 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 LHX5Q9H2C1 402 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 MRPL17Q9NRX2 175 aaKnown RBP12.21□□□□□ -0.45
CDCA3-206ENST00000536241 MTRRQ9UBK8 725 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 STK39Q9UEW8 545 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 NAGPAQ9UK23 515 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 LZTS1Q9Y250 596 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 BACE2Q9Y5Z0 518 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 CDY1Q9Y6F8 540 aa12.21□□□□□ -0.45
CDCA3-206ENST00000536241 NLRC5Q86WI3 1866 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 EIF3CLB5ME19 914 aaKnown RBP12.21□□□□□ -0.46
CDCA3-206ENST00000536241 H3BNC9 293 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 M0QYV0 167 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 LCA5LO95447 670 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 BDNFP23560 247 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 ANXA13P27216 316 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 GPD2P43304 727 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 GPR17Q13304 367 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 GPM6BQ13491 265 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 CAMK1Q14012 370 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 STILQ15468 1287 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 MAPRE1Q15691 268 aaKnown RBP12.21□□□□□ -0.46
CDCA3-206ENST00000536241 CLEC16AQ2KHT3 1053 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 PKDCCQ504Y2 493 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 PPP2R2DQ66LE6 453 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 RNF19BQ6ZMZ0 732 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 TTC30AQ86WT1 665 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 ANKRD52Q8NB46 1076 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 ACRBPQ8NEB7 543 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 ARNTL2Q8WYA1 636 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 MYLPFQ96A32 169 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 PGLYRP2Q96PD5 576 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 EIF3CQ99613 913 aaKnown RBP12.21□□□□□ -0.46
CDCA3-206ENST00000536241 TCF25Q9BQ70 676 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 DESI2Q9BSY9 194 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 C11orf84Q9BUA3 381 aaPredicted RBP12.21□□□□□ -0.46
CDCA3-206ENST00000536241 OXCT2Q9BYC2 517 aaPredicted RBP12.21□□□□□ -0.46
CDCA3-206ENST00000536241 RHOBTB2Q9BYZ6 727 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 ZNF518BQ9C0D4 1074 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 HESX1Q9UBX0 185 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 PYCARDQ9ULZ3 195 aa12.21□□□□□ -0.46
CDCA3-206ENST00000536241 PLXNA4Q9HCM2 1894 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 TSC2P49815 1807 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 TULP2O00295 520 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 RTN2O75298 545 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 BEST1O76090 585 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 FTLP02792 175 aaPredicted RBP12.2□□□□□ -0.46
CDCA3-206ENST00000536241 GZMAP12544 262 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 CPB1P15086 417 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 CYP2F1P24903 491 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 MAGEA1P43355 309 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 SMAD3P84022 425 aaKnown RBP12.2□□□□□ -0.46
CDCA3-206ENST00000536241 UBE3AQ05086 875 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 PDE4CQ08493 712 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 SPA17Q15506 151 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 PTPN14Q15678 1187 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 NAA35Q5VZE5 725 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 SLC8B1Q6J4K2 584 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 ACAD10Q6JQN1 1059 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 TRIM72Q6ZMU5 477 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 SPATA2LQ8IUW3 424 aaPredicted RBP12.2□□□□□ -0.46
CDCA3-206ENST00000536241 GPR65Q8IYL9 337 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 MRPL43Q8N983 215 aaKnown RBP12.2□□□□□ -0.46
CDCA3-206ENST00000536241 ATAD1Q8NBU5 361 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 TMEM35BQ8NCS4 154 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 C1orf131Q8NDD1 294 aaKnown RBP12.2□□□□□ -0.46
CDCA3-206ENST00000536241 SLC35F5Q8WV83 523 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 SECISBP2LQ93073 1101 aaKnown RBP12.2□□□□□ -0.46
CDCA3-206ENST00000536241 KCNK16Q96T55 309 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 DUSP16Q9BY84 665 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 TLR9Q9NR96 1032 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 ABI2Q9NYB9 513 aaPredicted RBP12.2□□□□□ -0.46
CDCA3-206ENST00000536241 CYTH4Q9UIA0 394 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 COLQQ9Y215 455 aaPredicted RBP12.2□□□□□ -0.46
CDCA3-206ENST00000536241 SSX2IPQ9Y2D8 614 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 REXO2Q9Y3B8 237 aaKnown RBP12.2□□□□□ -0.46
CDCA3-206ENST00000536241 PCDHGC5Q9Y5F6 944 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 PCDHA13Q9Y5I0 950 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 ADGRG1Q9Y653 693 aa12.2□□□□□ -0.46
CDCA3-206ENST00000536241 WDR27A2RRH5 827 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 RFXAPO00287 272 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 TEX28O15482 410 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 AP1G2O75843 785 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms