RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 MAP4K3Q8IVH8 894 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 RDM1Q8NG50 284 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 SLC35G2Q8TBE7 412 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 CTNNBL1Q8WYA6 563 aaPredicted RBP14.68□□□□□ -0.06
LIG1-203ENST00000536218 PPP2R3BQ9Y5P8 575 aa14.68□□□□□ -0.06
LIG1-203ENST00000536218 DOCK5Q9H7D0 1870 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 ATP2A1O14983 1001 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 PYGMP11217 842 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 ALOX15P16050 662 aaPredicted RBP14.67□□□□□ -0.06
LIG1-203ENST00000536218 KCNJ1P48048 391 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 DHX34Q14147 1143 aaKnown RBP14.67□□□□□ -0.06
LIG1-203ENST00000536218 NOL9Q5SY16 702 aaKnown RBP14.67□□□□□ -0.06
LIG1-203ENST00000536218 ARHGEF26Q96DR7 871 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 HES6Q96HZ4 224 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 FNBP1Q96RU3 617 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 ROPN1BQ9BZX4 212 aaPredicted RBP14.67□□□□□ -0.06
LIG1-203ENST00000536218 THAP2Q9H0W7 228 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 ROPN1Q9HAT0 212 aaPredicted RBP14.67□□□□□ -0.06
LIG1-203ENST00000536218 ADARB2Q9NS39 739 aaKnown RBP14.67□□□□□ -0.06
LIG1-203ENST00000536218 IGSF9BQ9UPX0 1349 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.67□□□□□ -0.06
LIG1-203ENST00000536218 CYP26A1O43174 497 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 RNASEH1O60930 286 aaKnown RBP14.67□□□□□ -0.06
LIG1-203ENST00000536218 SGPL1O95470 568 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 ACOT2P49753 483 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 SH3BGRP55822 239 aaPredicted RBP14.67□□□□□ -0.06
LIG1-203ENST00000536218 CALCOCO2Q13137 446 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 KYNUQ16719 465 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 OLFML1Q6UWY5 402 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 TAS1R2Q8TE23 839 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 PHF12Q96QT6 1004 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 NPHS2Q9NP85 383 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 PARP2Q9UGN5 583 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 STXBP5LQ9Y2K9 1186 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 TRIM43BA6NCK2 446 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 DKC1O60832 514 aaKnown RBP eCLIP14.67□□□□□ -0.061e-6■■□□□ 12.5
LIG1-203ENST00000536218 MLH1P40692 756 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 DSG1Q02413 1049 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 EPC2Q52LR7 807 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 XKR3Q5GH77 459 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 KLC3Q6P597 504 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 MCPH1Q8NEM0 835 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 SLC30A5Q8TAD4 765 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 ZNF668Q96K58 619 aaPredicted RBP14.67□□□□□ -0.06
LIG1-203ENST00000536218 ZBTB45Q96K62 511 aaPredicted RBP14.67□□□□□ -0.06
LIG1-203ENST00000536218 SERPINB12Q96P63 405 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 AGPAT1Q99943 283 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 SENP7Q9BQF6 1050 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 SPATC1LQ9H0A9 340 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 PCDH18Q9HCL0 1135 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 STX18Q9P2W9 335 aaKnown RBP14.67□□□□□ -0.06
LIG1-203ENST00000536218 CIDEBQ9UHD4 219 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 ZNF180Q9UJW8 692 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 WDR37Q9Y2I8 494 aa14.67□□□□□ -0.06
LIG1-203ENST00000536218 PHIPQ8WWQ0 1821 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 PGM3O95394 542 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 LIG4P49917 911 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 EMC2Q15006 297 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 LY6KQ17RY6 165 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 SEZ6Q53EL9 994 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 PPP1R21Q6ZMI0 780 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 NLRP9Q7RTR0 991 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 CHST13Q8NET6 341 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 DHX38Q92620 1227 aaKnown RBP14.66□□□□□ -0.06
LIG1-203ENST00000536218 ST6GALNAC4Q9H4F1 302 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 KIAA1217Q5T5P2 1943 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 SOWAHBA6NEL2 793 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 EAPPQ56P03 285 aaPredicted RBP14.66□□□□□ -0.06
LIG1-203ENST00000536218 CCDC137Q6PK04 289 aaKnown RBP14.66□□□□□ -0.06
LIG1-203ENST00000536218 C12orf56Q8IXR9 622 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 C17orf50Q8WW18 174 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 SLC35B4Q969S0 331 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 CORO1BQ9BR76 489 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 ADAM33Q9BZ11 813 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 PFDN4Q9NQP4 134 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 ANKFY1Q9P2R3 1169 aa14.66□□□□□ -0.06
LIG1-203ENST00000536218 BTNL10A8MVZ5 291 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 RASA4BC9J798 803 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 RASA4O43374 803 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 CCDC22O60826 627 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 FTLP02792 175 aaPredicted RBP14.65□□□□□ -0.06
LIG1-203ENST00000536218 UBA1P22314 1058 aaKnown RBP14.65□□□□□ -0.06
LIG1-203ENST00000536218 AMPD1P23109 780 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 TMED2Q15363 201 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 PPP2R5EQ16537 467 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 SH3D19Q5HYK7 790 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 KRT39Q6A163 491 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 SLC47A2Q86VL8 602 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 OLIG1Q8TAK6 271 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 KREMEN1Q96MU8 473 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 ZNF212Q9UDV6 495 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 STARD13Q9Y3M8 1113 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 TXNDC9O14530 226 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 GSC2O15499 205 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 ATMINO43313 823 aaPredicted RBP14.65□□□□□ -0.06
LIG1-203ENST00000536218 THAP12O43422 761 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 USP1O94782 785 aa14.65□□□□□ -0.06
LIG1-203ENST00000536218 IREB2P48200 963 aaKnown RBP14.65□□□□□ -0.06
LIG1-203ENST00000536218 WDR4P57081 412 aaKnown RBP14.65□□□□□ -0.06
LIG1-203ENST00000536218 COG7P83436 770 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms