RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 RBBP8NLQ8NC74 664 aaPredicted RBP9.5□□□□□ -0.89
SF3B2-216ENST00000534765 POMGNT1Q8WZA1 660 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 RMDN2Q96LZ7 410 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 PCDHB18PQ96TA0 734 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 INTS2Q9H0H0 1204 aaKnown RBP9.5□□□□□ -0.89
SF3B2-216ENST00000534765 AIPL1Q9NZN9 384 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 PDP2Q9P2J9 529 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 SEL1LQ9UBV2 794 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 MSCO60682 206 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 SRGAP2CP0DJJ0 459 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 ZBTB48P10074 688 aaPredicted RBP9.5□□□□□ -0.89
SF3B2-216ENST00000534765 IGFBP6P24592 240 aaPredicted RBP9.5□□□□□ -0.89
SF3B2-216ENST00000534765 ZNF200P98182 395 aaPredicted RBP9.5□□□□□ -0.89
SF3B2-216ENST00000534765 KCTD2Q14681 263 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 XKR3Q5GH77 459 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 U2AF1L4Q8WU68 220 aaKnown RBP9.5□□□□□ -0.89
SF3B2-216ENST00000534765 CATSPER2Q96P56 530 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 CORO1BQ9BR76 489 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 ADAM33Q9BZ11 813 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 MIS12Q9H081 205 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 RABL2AQ9UBK7 228 aaPredicted RBP9.5□□□□□ -0.89
SF3B2-216ENST00000534765 ARL2BPQ9Y2Y0 163 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 SNX24Q9Y343 169 aa9.5□□□□□ -0.89
SF3B2-216ENST00000534765 MYADML2A6NDP7 307 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 VAMP7P51809 220 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 POLGP54098 1239 aaPredicted RBP9.49□□□□□ -0.89
SF3B2-216ENST00000534765 BYSLQ13895 437 aaKnown RBP9.49□□□□□ -0.89
SF3B2-216ENST00000534765 GRB14Q14449 540 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 DRAP1Q14919 205 aaPredicted RBP9.49□□□□□ -0.89
SF3B2-216ENST00000534765 FBXL18Q96ME1 805 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 NAP1L3Q99457 506 aaPredicted RBP9.49□□□□□ -0.89
SF3B2-216ENST00000534765 PITPNM3Q9BZ71 974 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 IFT122Q9HBG6 1241 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 APOBEC3GQ9HC16 384 aaKnown RBP9.49□□□□□ -0.89
SF3B2-216ENST00000534765 ZNF148Q9UQR1 794 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 IGKV6-21A0A0C4DH24 114 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 SART1O43290 800 aaKnown RBP9.49□□□□□ -0.89
SF3B2-216ENST00000534765 XPOTO43592 962 aaKnown RBP9.49□□□□□ -0.89
SF3B2-216ENST00000534765 GRIN3BO60391 1043 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 DGAT1O75907 488 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 CST3P01034 146 aaPredicted RBP9.49□□□□□ -0.89
SF3B2-216ENST00000534765 CHRNB2P17787 502 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 FLT3P36888 993 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 ITIH4Q14624 930 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 LBRQ14739 615 aaKnown RBP9.49□□□□□ -0.89
SF3B2-216ENST00000534765 EEF1DP3Q658K8 133 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 SLC30A5Q8TAD4 765 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 ATP6V0A1Q93050 837 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 ARHGEF26Q96DR7 871 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 ACCSQ96QU6 501 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 TGS1Q96RS0 853 aaKnown RBP9.49□□□□□ -0.89
SF3B2-216ENST00000534765 OSGEPQ9NPF4 335 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 DNAJC12Q9UKB3 198 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 CNTNAP2Q9UHC6 1331 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 LRRIQ4A6NIV6 560 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 TTI1O43156 1089 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 CBX6O95503 412 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 ACSL3O95573 720 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 VTNP04004 478 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 OSBPP22059 807 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 COPB2P35606 906 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 CD151P48509 253 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 TDRD10Q5VZ19 366 aaKnown RBP9.49□□□□□ -0.89
SF3B2-216ENST00000534765 SLC47A2Q86VL8 602 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 GLYCTKQ8IVS8 523 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 TRPV1Q8NER1 839 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 HELQQ8TDG4 1101 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 LRRC37BQ96QE4 947 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.49□□□□□ -0.89
SF3B2-216ENST00000534765 DCTN4Q9UJW0 460 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 COG5Q9UP83 839 aa9.49□□□□□ -0.89
SF3B2-216ENST00000534765 RASGRF2O14827 1237 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 ATMINO43313 823 aaPredicted RBP9.48□□□□□ -0.89
SF3B2-216ENST00000534765 MAFO75444 373 aaPredicted RBP9.48□□□□□ -0.89
SF3B2-216ENST00000534765 KRT36O76013 467 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 SGPL1O95470 568 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 SLC25A27O95847 323 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 ITGA2BP08514 1039 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 DLATP10515 647 aaKnown RBP9.48□□□□□ -0.89
SF3B2-216ENST00000534765 HARSP12081 509 aaKnown RBP9.48□□□□□ -0.89
SF3B2-216ENST00000534765 PSMD7P51665 324 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 HTRA3P83110 453 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 CDK17Q00537 523 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 DMP1Q13316 513 aaPredicted RBP9.48□□□□□ -0.89
SF3B2-216ENST00000534765 ZBTB33Q86T24 672 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 SEPT1Q8WYJ6 367 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 DHRS1Q96LJ7 313 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 ARPC5LQ9BPX5 153 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 STMN4Q9H169 189 aaPredicted RBP9.48□□□□□ -0.89
SF3B2-216ENST00000534765 ANLNQ9NQW6 1124 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 ANKFY1Q9P2R3 1169 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 MORF4L1Q9UBU8 362 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 SLC12A6Q9UHW9 1150 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 PASKQ96RG2 1323 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 MCCD1P59942 119 aaPredicted RBP9.48□□□□□ -0.89
SF3B2-216ENST00000534765 LAMTOR4Q0VGL1 99 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 GRM1Q13255 1194 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 DAB2IPQ5VWQ8 1189 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 SV2AQ7L0J3 742 aa9.48□□□□□ -0.89
SF3B2-216ENST00000534765 ZBTB46Q86UZ6 589 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms