RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 CATSPERBQ9H7T0 1116 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 FAM8A1Q9UBU6 413 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 GRID1Q9ULK0 1009 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 LY6KQ17RY6 165 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 IL31Q6EBC2 164 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 LRRC6Q86X45 466 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 ABRAQ8N0Z2 381 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 CERS5Q8N5B7 392 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 HAS1Q92839 578 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 ELMO2Q96JJ3 720 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 XAB2Q9HCS7 855 aaKnown RBP18.3■□□□□ 0.52
PHRF1-205ENST00000533464 WHRNQ9P202 907 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 ZSCAN5CA6NGD5 496 aaPredicted RBP18.3■□□□□ 0.52
PHRF1-205ENST00000533464 MTSS1O43312 755 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 KCNA2P16389 499 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 NIPA1Q7RTP0 329 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 LRRC34Q8IZ02 419 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 EXD1Q8NHP7 514 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 MKL1Q969V6 931 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 CENPKQ9BS16 269 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 GPATCH2LQ9NWQ4 482 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 H3BQF6 201 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 TLR2O60603 784 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 TGFB3P10600 412 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 ZBTB41Q5SVQ8 909 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 TEDDM1Q5T9Z0 273 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 KIF2BQ8N4N8 673 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 SLC25A41Q8N5S1 370 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 DTX3LQ8TDB6 740 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 SPIRE2Q8WWL2 714 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 TMEM121Q9BTD3 319 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 TRIM54Q9BYV2 358 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 MTFR1LQ9H019 292 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 MANSC1Q9H8J5 431 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 CAND2O75155 1236 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 PTPN11Q06124 597 aaPredicted RBP18.29■□□□□ 0.52
PHRF1-205ENST00000533464 LBRQ14739 615 aaKnown RBP18.29■□□□□ 0.52
PHRF1-205ENST00000533464 MAPRE2Q15555 327 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 CNPY4Q8N129 248 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 DDX50Q9BQ39 737 aaKnown RBP18.29■□□□□ 0.52
PHRF1-205ENST00000533464 CDC42EP4Q9H3Q1 356 aaKnown RBP18.29■□□□□ 0.52
PHRF1-205ENST00000533464 TRPC7Q9HCX4 862 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 DNAJC6O75061 913 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 C11orf63Q6NUN7 778 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 SH3TC2Q8TF17 1288 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 HDAC7Q8WUI4 952 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 AP1G2O75843 785 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 CYP3A4P08684 503 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 SLURP2P0DP57 97 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 ANO5Q75V66 913 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 PLEKHH3Q7Z736 793 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 LONP2Q86WA8 852 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 AGGF1Q8N302 714 aaeCLIP18.29■□□□□ 0.528e-7■□□□□ 10.2
PHRF1-205ENST00000533464 FAM172AQ8WUF8 416 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 TMBIM4Q9HC24 238 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 FARP1Q9Y4F1 1045 aaPredicted RBP18.29■□□□□ 0.52
PHRF1-205ENST00000533464 LSM8O95777 96 aaKnown RBP18.29■□□□□ 0.52
PHRF1-205ENST00000533464 MCL1Q07820 350 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 PDAP1Q13442 181 aaKnown RBP18.29■□□□□ 0.52
PHRF1-205ENST00000533464 PTF1AQ7RTS3 328 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 CCDC33Q8N5R6 958 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 E2F7Q96AV8 911 aa18.29■□□□□ 0.52
PHRF1-205ENST00000533464 MMTAG2Q9BU76 263 aaKnown RBP18.29■□□□□ 0.52
PHRF1-205ENST00000533464 SPOCD1Q6ZMY3 1216 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 MCOLN2Q8IZK6 566 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 ARMC2Q8NEN0 867 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 ZNF606Q8WXB4 792 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 KCNMB3Q9NPA1 279 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 SIK3Q9Y2K2 1263 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 H3BRB1 525 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 KLRC4O43908 158 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 SERPINB4P48594 390 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 CASP5P51878 434 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 PTENP60484 403 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 RBBP7Q16576 425 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 NAPEPLDQ6IQ20 393 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 FBXO36Q8NEA4 188 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 MYCBPAPQ8TBZ2 947 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 NRBF2Q96F24 287 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 TMEM176AQ96HP8 235 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 CNPY3Q9BT09 278 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 TUT1Q9H6E5 874 aaKnown RBP18.28■□□□□ 0.52
PHRF1-205ENST00000533464 INSRRP14616 1297 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 IL17AQ16552 155 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 CCNG2Q16589 344 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 CBWD6Q4V339 395 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 CBWD3Q5JTY5 395 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 CBWD5Q5RIA9 395 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 C9orf131Q5VYM1 1079 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 EFHBQ8N7U6 833 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 TSPAN17Q96FV3 270 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 WDCPQ9H6R7 721 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 PIDD1Q9HB75 910 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 INTS13Q9NVM9 706 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 MYL2P10916 166 aa18.28■□□□□ 0.52
PHRF1-205ENST00000533464 FKBP1AP62942 108 aaKnown RBP18.28■□□□□ 0.52
PHRF1-205ENST00000533464 ZC3H15Q8WU90 426 aaKnown RBP18.28■□□□□ 0.52
PHRF1-205ENST00000533464 ABI2Q9NYB9 513 aaPredicted RBP18.28■□□□□ 0.52
PHRF1-205ENST00000533464 MTO1Q9Y2Z2 717 aaKnown RBP18.28■□□□□ 0.52
PHRF1-205ENST00000533464 MEIS2O14770 477 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms