RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 NME7Q9Y5B8 376 aa32.37■■■□□ 2.77
SSSCA1-207ENST00000533115 NCANO14594 1321 aa32.36■■■□□ 2.77
SSSCA1-207ENST00000533115 VAMP7P51809 220 aa32.36■■■□□ 2.77
SSSCA1-207ENST00000533115 ADAM9Q13443 819 aa32.36■■■□□ 2.77
SSSCA1-207ENST00000533115 ZACNQ401N2 412 aa32.36■■■□□ 2.77
SSSCA1-207ENST00000533115 ZCWPW2Q504Y3 356 aa32.36■■■□□ 2.77
SSSCA1-207ENST00000533115 C1orf220Q5T0J3 134 aa32.36■■■□□ 2.77
SSSCA1-207ENST00000533115 SCN4BQ8IWT1 228 aa32.36■■■□□ 2.77
SSSCA1-207ENST00000533115 MYCBPAPQ8TBZ2 947 aa32.36■■■□□ 2.77
SSSCA1-207ENST00000533115 IRF7Q92985 503 aa32.36■■■□□ 2.77
SSSCA1-207ENST00000533115 RSPRY1Q96DX4 576 aa32.36■■■□□ 2.77
SSSCA1-207ENST00000533115 FOXQ1Q9C009 403 aa32.36■■■□□ 2.77
SSSCA1-207ENST00000533115 CACNA1HO95180 2353 aa32.35■■■□□ 2.77
SSSCA1-207ENST00000533115 KANSL1LA0AUZ9 987 aa32.35■■■□□ 2.77
SSSCA1-207ENST00000533115 CLSTN1O94985 981 aa32.35■■■□□ 2.77
SSSCA1-207ENST00000533115 SMC2O95347 1197 aa32.35■■■□□ 2.77
SSSCA1-207ENST00000533115 F11P03951 625 aa32.35■■■□□ 2.77
SSSCA1-207ENST00000533115 WEE1P30291 646 aa32.35■■■□□ 2.77
SSSCA1-207ENST00000533115 GDI1P31150 447 aa32.35■■■□□ 2.77
SSSCA1-207ENST00000533115 NLRP12P59046 1061 aa32.35■■■□□ 2.77
SSSCA1-207ENST00000533115 ZNF667Q5HYK9 610 aa32.35■■■□□ 2.77
SSSCA1-207ENST00000533115 INTS8Q75QN2 995 aaKnown RBP32.35■■■□□ 2.77
SSSCA1-207ENST00000533115 SV2AQ7L0J3 742 aa32.35■■■□□ 2.77
SSSCA1-207ENST00000533115 TMEM150AQ86TG1 271 aa32.35■■■□□ 2.77
SSSCA1-207ENST00000533115 GPIHBP1Q8IV16 184 aa32.35■■■□□ 2.77
SSSCA1-207ENST00000533115 DTWD2Q8NBA8 298 aa32.35■■■□□ 2.77
SSSCA1-207ENST00000533115 HOOK1Q9UJC3 728 aaKnown RBP32.35■■■□□ 2.77
SSSCA1-207ENST00000533115 SLC38A8A6NNN8 435 aa32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 H0Y858 1186 aa32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 NOL4O94818 638 aa32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 PSMC2P35998 433 aaKnown RBP32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 CYP27A1Q02318 531 aa32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 SGSM1Q2NKQ1 1148 aa32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 EDRF1Q3B7T1 1238 aa32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 MDH1BQ5I0G3 518 aa32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 VSTM1Q6UX27 236 aa32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 FAM186BQ8IYM0 893 aa32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 PJA1Q8NG27 643 aa32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 SPATA20Q8TB22 786 aa32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 PCED1BQ96HM7 432 aa32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 SMYD3Q9H7B4 428 aa32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 HEBP1Q9NRV9 189 aa32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 UXTQ9UBK9 157 aaPredicted RBP32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 ZMYM5Q9UJ78 669 aa32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 PCDHA5Q9Y5H7 936 aa32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 COL4A3Q01955 1670 aa32.34■■■□□ 2.77
SSSCA1-207ENST00000533115 A8MXQ7 604 aa32.33■■■□□ 2.77
SSSCA1-207ENST00000533115 ZNF263O14978 683 aa32.33■■■□□ 2.77
SSSCA1-207ENST00000533115 DCNP07585 359 aaKnown RBP32.33■■■□□ 2.77
SSSCA1-207ENST00000533115 PTPN1P18031 435 aaKnown RBP32.33■■■□□ 2.77
SSSCA1-207ENST00000533115 BDNFP23560 247 aa32.33■■■□□ 2.77
SSSCA1-207ENST00000533115 ZNF658Q5TYW1 1059 aaPredicted RBP32.33■■■□□ 2.77
SSSCA1-207ENST00000533115 YAF2Q8IY57 180 aa32.33■■■□□ 2.77
SSSCA1-207ENST00000533115 ERCC4Q92889 916 aaPredicted RBP32.33■■■□□ 2.77
SSSCA1-207ENST00000533115 SMARCE1Q969G3 411 aa32.33■■■□□ 2.77
SSSCA1-207ENST00000533115 TRMT2BQ96GJ1 504 aaKnown RBP32.33■■■□□ 2.77
SSSCA1-207ENST00000533115 SLC46A2Q9BY10 475 aa32.33■■■□□ 2.77
SSSCA1-207ENST00000533115 DPEP3Q9H4B8 488 aa32.33■■■□□ 2.77
SSSCA1-207ENST00000533115 TRPV5Q9NQA5 729 aa32.33■■■□□ 2.77
SSSCA1-207ENST00000533115 NUP210Q8TEM1 1887 aaPredicted RBP32.33■■■□□ 2.77
SSSCA1-207ENST00000533115 DPYSL4O14531 572 aa32.32■■■□□ 2.76
SSSCA1-207ENST00000533115 KRT13P13646 458 aa32.32■■■□□ 2.76
SSSCA1-207ENST00000533115 DDX6P26196 483 aaKnown RBP eCLIP32.32■■■□□ 2.76
SSSCA1-207ENST00000533115 PRCPP42785 496 aa32.32■■■□□ 2.76
SSSCA1-207ENST00000533115 ENPEPQ07075 957 aa32.32■■■□□ 2.76
SSSCA1-207ENST00000533115 COBLL1Q53SF7 1204 aa32.32■■■□□ 2.76
SSSCA1-207ENST00000533115 TPRG1Q6ZUI0 275 aa32.32■■■□□ 2.76
SSSCA1-207ENST00000533115 TAF4BQ92750 862 aa32.32■■■□□ 2.76
SSSCA1-207ENST00000533115 ELMO3Q96BJ8 720 aa32.32■■■□□ 2.76
SSSCA1-207ENST00000533115 MYRFLQ96LU7 910 aa32.32■■■□□ 2.76
SSSCA1-207ENST00000533115 OBP2AQ9NY56 170 aa32.32■■■□□ 2.76
SSSCA1-207ENST00000533115 DLGAP2Q9P1A6 1054 aa32.32■■■□□ 2.76
SSSCA1-207ENST00000533115 CDH8P55286 799 aa32.31■■■□□ 2.76
SSSCA1-207ENST00000533115 FCHO2Q0JRZ9 810 aa32.31■■■□□ 2.76
SSSCA1-207ENST00000533115 ELOA2Q8IYF1 753 aaPredicted RBP32.31■■■□□ 2.76
SSSCA1-207ENST00000533115 ATOH1Q92858 354 aaPredicted RBP32.31■■■□□ 2.76
SSSCA1-207ENST00000533115 SPATA17Q96L03 361 aa32.31■■■□□ 2.76
SSSCA1-207ENST00000533115 PRAMEF12O95522 483 aa32.3■■■□□ 2.76
SSSCA1-207ENST00000533115 TRIM49P0CI25 452 aa32.3■■■□□ 2.76
SSSCA1-207ENST00000533115 TRIM49CP0CI26 452 aa32.3■■■□□ 2.76
SSSCA1-207ENST00000533115 P4HA1P13674 534 aa32.3■■■□□ 2.76
SSSCA1-207ENST00000533115 CD72P21854 359 aa32.3■■■□□ 2.76
SSSCA1-207ENST00000533115 HOXD11P31277 338 aaPredicted RBP32.3■■■□□ 2.76
SSSCA1-207ENST00000533115 GRIK1P39086 918 aa32.3■■■□□ 2.76
SSSCA1-207ENST00000533115 RAP1GAPP47736 663 aa32.3■■■□□ 2.76
SSSCA1-207ENST00000533115 SCARA5Q6ZMJ2 495 aa32.3■■■□□ 2.76
SSSCA1-207ENST00000533115 CMTM8Q8IZV2 173 aa32.3■■■□□ 2.76
SSSCA1-207ENST00000533115 B3GALNT2Q8NCR0 500 aa32.3■■■□□ 2.76
SSSCA1-207ENST00000533115 MRPS31Q92665 395 aaKnown RBP32.3■■■□□ 2.76
SSSCA1-207ENST00000533115 CEP295NLQ96MC4 621 aa32.3■■■□□ 2.76
SSSCA1-207ENST00000533115 LRRC3BQ96PB8 259 aa32.3■■■□□ 2.76
SSSCA1-207ENST00000533115 GTPBP4Q9BZE4 634 aaKnown RBP32.3■■■□□ 2.76
SSSCA1-207ENST00000533115 OSBPL6Q9BZF3 934 aa32.3■■■□□ 2.76
SSSCA1-207ENST00000533115 DENND4CQ5VZ89 1909 aa32.3■■■□□ 2.76
SSSCA1-207ENST00000533115 SOBPA7XYQ1 873 aa32.29■■■□□ 2.76
SSSCA1-207ENST00000533115 CHADO15335 359 aa32.29■■■□□ 2.76
SSSCA1-207ENST00000533115 HLA-DRAP01903 254 aa32.29■■■□□ 2.76
SSSCA1-207ENST00000533115 PIK3CAP42336 1068 aa32.29■■■□□ 2.76
SSSCA1-207ENST00000533115 UBXN2BQ14CS0 331 aa32.29■■■□□ 2.76
SSSCA1-207ENST00000533115 ZNF852Q6ZMS4 543 aa32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms