RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 RAD18Q9NS91 495 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 FARP1Q9Y4F1 1045 aaPredicted RBP7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 SNX13Q9Y5W8 968 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 ADGRA3Q8IWK6 1321 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 FAM196BA6NMK8 535 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 GABBR2O75899 941 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 CSF1RP07333 972 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 CPB1P15086 417 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 SLFN12LQ6IEE8 588 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 TBC1D16Q8TBP0 767 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 TOR3AQ9H497 397 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 TOPORSQ9NS56 1045 aaPredicted RBP7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 NSMCE4AQ9NXX6 385 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 FBXO40Q9UH90 709 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 IQANK1A0A1B0GTG1 560 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 F5H423 210 aaPredicted RBP7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 CCDC188H7C350 402 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 COPEO14579 308 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 HSPA4LO95757 839 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 FGGP02679 453 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 IFI30P13284 250 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 TRAP1Q12931 704 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 NR1H3Q13133 447 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 SNAP47Q5SQN1 464 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 GIMAP8Q8ND71 665 aaPredicted RBP7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 DHTKD1Q96HY7 919 aaPredicted RBP7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 TUBGCP5Q96RT8 1024 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 TMEM245Q9H330 911 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 STOML2Q9UJZ1 356 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 FAM95CA0A1B0GW59 222 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 USP17L5A8MUK1 530 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 TBC1D4O60343 1298 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 CDC40O60508 579 aaKnown RBP eCLIP7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 CPA3P15088 417 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 PAMP19021 973 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 IL4RP24394 825 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 JAK3P52333 1124 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 FOXO4P98177 505 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 GRSF1Q12849 480 aaKnown RBP eCLIP7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 PDIA6Q15084 440 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 PON2Q15165 354 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 KIF19Q2TAC6 998 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 SLC10A5Q5PT55 438 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 ZBTB46Q86UZ6 589 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 MYO1HQ8N1T3 1032 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 RSPH1Q8WYR4 309 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 DHX38Q92620 1227 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 PUS7LQ9H0K6 701 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 RNPEPL1Q9HAU8 725 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 DYRK4Q9NR20 520 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 CTNNAL1Q9UBT7 734 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 VPS4AQ9UN37 437 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 MED1Q15648 1581 aaPredicted RBP7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 CLDN3O15551 220 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 TTI1O43156 1089 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 MTSS1O43312 755 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 ALOX5P09917 674 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 MYBP10242 640 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 MARSP56192 900 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 TNFAIP2Q03169 654 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 TTLL4Q14679 1199 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 MAN2A1Q16706 1144 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 PUS10Q3MIT2 529 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 GDPD5Q8WTR4 605 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 OTULINQ96BN8 352 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 NUP85Q9BW27 656 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 WWP1Q9H0M0 922 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 STARD7Q9NQZ5 370 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 ENTPD7Q9NQZ7 604 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 ABHD10Q9NUJ1 306 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 AFF4Q9UHB7 1163 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 GTF3C4Q9UKN8 822 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 TMCC3Q9ULS5 477 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 COL3A1P02461 1466 aaPredicted RBP7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 PDLIM1O00151 329 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 PLCG1P19174 1290 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 RPS12P25398 132 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 CCNFP41002 786 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 CHN2P52757 468 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 OCRLQ01968 901 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 NR5A1Q13285 461 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 CYP4A22Q5TCH4 519 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 ZNF658Q5TYW1 1059 aaPredicted RBP7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 POTEAQ6S8J7 498 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 PGBD3Q8N328 593 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 PPHLN1Q8NEY8 458 aaKnown RBP7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 BEST2Q8NFU1 509 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 KCNK16Q96T55 309 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 RFX7Q2KHR2 1363 aa7.24□□□□□ -1.25
TGFBR3-210ENST00000533089 SUPT3HB4E1H0 165 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 MOCS2O96007 188 aaPredicted RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 GTF2H1P32780 548 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 KPNA1P52294 538 aaPredicted RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 COPZ1P61923 177 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 MAPK6Q16659 721 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 ZFP69Q49AA0 526 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 DDX53Q86TM3 631 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 ZNF589Q86UQ0 364 aaPredicted RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 IFNEQ86WN2 208 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 NAT14Q8WUY8 206 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms