RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 WEE2P0C1S8 567 aa9.85□□□□□ -0.83
BDNF-216ENST00000532997 RBP3P10745 1247 aa9.85□□□□□ -0.83
BDNF-216ENST00000532997 CACNA2D1P54289 1103 aa9.85□□□□□ -0.83
BDNF-216ENST00000532997 NOMO3P69849 1222 aa9.85□□□□□ -0.83
BDNF-216ENST00000532997 OTUD4Q01804 1114 aaKnown RBP9.85□□□□□ -0.83
BDNF-216ENST00000532997 TNFAIP1Q13829 316 aa9.85□□□□□ -0.83
BDNF-216ENST00000532997 ZNF699Q32M78 642 aa9.85□□□□□ -0.83
BDNF-216ENST00000532997 FAM160B1Q5W0V3 765 aa9.85□□□□□ -0.83
BDNF-216ENST00000532997 SCUBE1Q8IWY4 988 aa9.85□□□□□ -0.83
BDNF-216ENST00000532997 C10orf82Q8WW14 230 aa9.85□□□□□ -0.83
BDNF-216ENST00000532997 HSPH1Q92598 858 aa9.85□□□□□ -0.83
BDNF-216ENST00000532997 CGRRF1Q99675 332 aa9.85□□□□□ -0.83
BDNF-216ENST00000532997 GCOM2Q9BZD3 368 aaPredicted RBP9.85□□□□□ -0.83
BDNF-216ENST00000532997 PPP1R1BQ9UD71 204 aaPredicted RBP9.85□□□□□ -0.83
BDNF-216ENST00000532997 FCHO1O14526 889 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 CREB3O43889 395 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 KLHL2O95198 593 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 UNGP13051 313 aaPredicted RBP9.84□□□□□ -0.83
BDNF-216ENST00000532997 TAS2R40P59535 323 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 TFAMQ00059 246 aaKnown RBP9.84□□□□□ -0.83
BDNF-216ENST00000532997 DUOXA2Q1HG44 320 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 CMPK2Q5EBM0 449 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 EFHC2Q5JST6 749 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 PLEKHA7Q6IQ23 1121 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 C4orf50Q6ZRC1 276 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 EXOC8Q8IYI6 725 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 ACTL9Q8TC94 416 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 NSUN6Q8TEA1 469 aaKnown RBP9.84□□□□□ -0.83
BDNF-216ENST00000532997 GPRASP2Q96D09 838 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 OXNAD1Q96HP4 312 aaPredicted RBP9.84□□□□□ -0.83
BDNF-216ENST00000532997 AGBL1Q96MI9 1066 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 ACAP3Q96P50 834 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 FIZ1Q96SL8 496 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 ZNF184Q99676 751 aaPredicted RBP9.84□□□□□ -0.83
BDNF-216ENST00000532997 SUDS3Q9H7L9 328 aaPredicted RBP9.84□□□□□ -0.83
BDNF-216ENST00000532997 NHSL1Q5SYE7 1610 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 SERPINB3P29508 390 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 SSTR3P32745 418 aaPredicted RBP9.84□□□□□ -0.83
BDNF-216ENST00000532997 MED21Q13503 144 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 SGSM1Q2NKQ1 1148 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 ZNF394Q53GI3 561 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 FSCBQ5H9T9 825 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 SCYL2Q6P3W7 929 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 C4orf22Q6V702 233 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 RASSF3Q86WH2 238 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 LRRC6Q86X45 466 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 DEPDC1BQ8WUY9 529 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 FAXDC2Q96IV6 333 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 SERPINI1Q99574 410 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 THTPAQ9BU02 230 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 NIF3L1Q9GZT8 377 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 TAGLN3Q9UI15 199 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 TGDSO95455 350 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 FESP07332 822 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 OSBPP22059 807 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 SSTR1P30872 391 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 PDE1BQ01064 536 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 KDSRQ06136 332 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 STX3Q13277 289 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 SLC1A5Q15758 541 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 ZNF667Q5HYK9 610 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 GPAT2Q6NUI2 795 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 MON1BQ7L1V2 547 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 SPATA24Q86W54 205 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 SLC26A11Q86WA9 606 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 ENDOVQ8N8Q3 282 aaKnown RBP9.84□□□□□ -0.83
BDNF-216ENST00000532997 TTC8Q8TAM2 541 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 NKD2Q969F2 451 aaPredicted RBP9.84□□□□□ -0.83
BDNF-216ENST00000532997 ADPGKQ9BRR6 497 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 CCDC28BQ9BUN5 200 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 DENND2DQ9H6A0 471 aaPredicted RBP9.84□□□□□ -0.83
BDNF-216ENST00000532997 AS3MTQ9HBK9 375 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 JPH1Q9HDC5 661 aaPredicted RBP9.84□□□□□ -0.83
BDNF-216ENST00000532997 KCNK4Q9NYG8 393 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 UBIAD1Q9Y5Z9 338 aa9.84□□□□□ -0.83
BDNF-216ENST00000532997 TRIM49D1C9J1S8 452 aa9.83□□□□□ -0.84
BDNF-216ENST00000532997 KRT72Q14CN4 511 aa9.83□□□□□ -0.84
BDNF-216ENST00000532997 ZACNQ401N2 412 aa9.83□□□□□ -0.84
BDNF-216ENST00000532997 CPNE8Q86YQ8 564 aa9.83□□□□□ -0.84
BDNF-216ENST00000532997 ZNF606Q8WXB4 792 aa9.83□□□□□ -0.84
BDNF-216ENST00000532997 FHDC1Q9C0D6 1143 aaPredicted RBP9.83□□□□□ -0.84
BDNF-216ENST00000532997 FBXO28Q9NVF7 368 aa9.83□□□□□ -0.84
BDNF-216ENST00000532997 NMRK1Q9NWW6 199 aa9.83□□□□□ -0.84
BDNF-216ENST00000532997 NDUFA13Q9P0J0 144 aa9.83□□□□□ -0.84
BDNF-216ENST00000532997 ZC3H7BQ9UGR2 993 aaKnown RBP9.83□□□□□ -0.84
BDNF-216ENST00000532997 EFR3BQ9Y2G0 817 aa9.83□□□□□ -0.84
BDNF-216ENST00000532997 IVNS1ABPQ9Y6Y0 642 aa9.83□□□□□ -0.84
BDNF-216ENST00000532997 FOXO6A8MYZ6 492 aa9.83□□□□□ -0.84
BDNF-216ENST00000532997 CYP1A1P04798 512 aaPredicted RBP9.83□□□□□ -0.84
BDNF-216ENST00000532997 ZSCAN5DPP0CG00 497 aa9.83□□□□□ -0.84
BDNF-216ENST00000532997 ITGB5P18084 799 aa9.83□□□□□ -0.84
BDNF-216ENST00000532997 AP1B1Q10567 949 aa9.83□□□□□ -0.84
BDNF-216ENST00000532997 MPP2Q14168 576 aa9.83□□□□□ -0.84
BDNF-216ENST00000532997 SCARA5Q6ZMJ2 495 aa9.83□□□□□ -0.84
BDNF-216ENST00000532997 PRPF39Q86UA1 669 aaKnown RBP9.83□□□□□ -0.84
BDNF-216ENST00000532997 ARID3BQ8IVW6 561 aaPredicted RBP9.83□□□□□ -0.84
BDNF-216ENST00000532997 SPATA18Q8TC71 538 aa9.83□□□□□ -0.84
BDNF-216ENST00000532997 NR1H4Q96RI1 486 aaPredicted RBP9.83□□□□□ -0.84
BDNF-216ENST00000532997 RNF146Q9NTX7 359 aa9.83□□□□□ -0.84
BDNF-216ENST00000532997 NXF1Q9UBU9 619 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms