RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-209ENST00000532347 NR2E3Q9Y5X4 410 aa9.06□□□□□ -0.96
KNL1-209ENST00000532347 CXorf49A8MYA2 514 aaPredicted RBP9.05□□□□□ -0.96
KNL1-209ENST00000532347 TEX33O43247 280 aa9.05□□□□□ -0.96
KNL1-209ENST00000532347 B3GALT2O43825 422 aa9.05□□□□□ -0.96
KNL1-209ENST00000532347 TUSC2O75896 110 aa9.05□□□□□ -0.96
KNL1-209ENST00000532347 MYL6BP14649 208 aa9.05□□□□□ -0.96
KNL1-209ENST00000532347 PTH1RQ03431 593 aa9.05□□□□□ -0.96
KNL1-209ENST00000532347 MFSD5Q6N075 450 aa9.05□□□□□ -0.96
KNL1-209ENST00000532347 RASAL3Q86YV0 1011 aa9.05□□□□□ -0.96
KNL1-209ENST00000532347 DCBLD1Q8N8Z6 715 aa9.05□□□□□ -0.96
KNL1-209ENST00000532347 PLBD2Q8NHP8 589 aa9.05□□□□□ -0.96
KNL1-209ENST00000532347 RBM15Q96T37 977 aaKnown RBP eCLIP9.05□□□□□ -0.96
KNL1-209ENST00000532347 LRFN3Q9BTN0 628 aa9.05□□□□□ -0.96
KNL1-209ENST00000532347 SLC23A1Q9UHI7 598 aa9.05□□□□□ -0.96
KNL1-209ENST00000532347 TRMT112Q9UI30 125 aaKnown RBP9.05□□□□□ -0.96
KNL1-209ENST00000532347 STXBP5LQ9Y2K9 1186 aa9.05□□□□□ -0.96
KNL1-209ENST00000532347 PCDHA3Q9Y5H8 950 aa9.05□□□□□ -0.96
KNL1-209ENST00000532347 FRMPD2Q68DX3 1309 aaPredicted RBP9.05□□□□□ -0.96
KNL1-209ENST00000532347 MAPK8IP3Q9UPT6 1336 aa9.05□□□□□ -0.96
KNL1-209ENST00000532347 A6NNZ2 444 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 B5MCH6 92 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 ECE2O60344 883 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 MALP21145 153 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 HTR1BP28222 390 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 NF2P35240 595 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 IL12RB1P42701 662 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 SNAPC2Q13487 334 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 DCTN1Q14203 1278 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 CCDC157Q569K6 752 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 OTUD7BQ6GQQ9 843 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 PLXDC1Q8IUK5 500 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 ELOA2Q8IYF1 753 aaPredicted RBP9.04□□□□□ -0.96
KNL1-209ENST00000532347 D2HGDHQ8N465 521 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 KLHDC4Q8TBB5 520 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 CDCA5Q96FF9 252 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 MYOCQ99972 504 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 MRI1Q9BV20 369 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 LSM14BQ9BX40 385 aaKnown RBP9.04□□□□□ -0.96
KNL1-209ENST00000532347 GGA3Q9NZ52 723 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 TSPYL4Q9UJ04 414 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 HDAC9Q9UKV0 1011 aa9.04□□□□□ -0.96
KNL1-209ENST00000532347 POLR2AP24928 1970 aaKnown RBP9.04□□□□□ -0.96
KNL1-209ENST00000532347 RTL9Q8NET4 1388 aa9.03□□□□□ -0.96
KNL1-209ENST00000532347 PATE3B3GLJ2 98 aa9.03□□□□□ -0.96
KNL1-209ENST00000532347 ITGB3P05106 788 aa9.03□□□□□ -0.96
KNL1-209ENST00000532347 GNAT2P19087 354 aa9.03□□□□□ -0.96
KNL1-209ENST00000532347 SOX10P56693 466 aa9.03□□□□□ -0.96
KNL1-209ENST00000532347 RPS8P62241 208 aaKnown RBP9.03□□□□□ -0.96
KNL1-209ENST00000532347 GALEQ14376 348 aa9.03□□□□□ -0.96
KNL1-209ENST00000532347 ELAVL1Q15717 326 aaKnown RBP9.03□□□□□ -0.96
KNL1-209ENST00000532347 SLC4A10Q6U841 1118 aa9.03□□□□□ -0.96
KNL1-209ENST00000532347 TTLL10Q6ZVT0 673 aa9.03□□□□□ -0.96
KNL1-209ENST00000532347 DOK3Q7L591 496 aa9.03□□□□□ -0.96
KNL1-209ENST00000532347 HEATR3Q7Z4Q2 680 aa9.03□□□□□ -0.96
KNL1-209ENST00000532347 POLNQ7Z5Q5 900 aa9.03□□□□□ -0.96
KNL1-209ENST00000532347 APBB1IPQ7Z5R6 666 aaPredicted RBP9.03□□□□□ -0.96
KNL1-209ENST00000532347 NGEFQ8N5V2 710 aa9.03□□□□□ -0.96
KNL1-209ENST00000532347 TBC1D16Q8TBP0 767 aa9.03□□□□□ -0.96
KNL1-209ENST00000532347 CDK5RAP3Q96JB5 506 aa9.03□□□□□ -0.96
KNL1-209ENST00000532347 CPPED1Q9BRF8 314 aaPredicted RBP9.03□□□□□ -0.96
KNL1-209ENST00000532347 ISCA1Q9BUE6 129 aa9.03□□□□□ -0.96
KNL1-209ENST00000532347 TMEM60Q9H2L4 133 aa9.03□□□□□ -0.96
KNL1-209ENST00000532347 MAN1C1Q9NR34 630 aa9.03□□□□□ -0.96
KNL1-209ENST00000532347 TBKBP1A7MCY6 615 aa9.02□□□□□ -0.97
KNL1-209ENST00000532347 PJA2O43164 708 aa9.02□□□□□ -0.97
KNL1-209ENST00000532347 ATP5JP18859 108 aa9.02□□□□□ -0.97
KNL1-209ENST00000532347 USP14P54578 494 aa9.02□□□□□ -0.97
KNL1-209ENST00000532347 LLGL1Q15334 1064 aa9.02□□□□□ -0.97
KNL1-209ENST00000532347 COPS6Q7L5N1 327 aa9.02□□□□□ -0.97
KNL1-209ENST00000532347 CHST15Q7LFX5 561 aaPredicted RBP9.02□□□□□ -0.97
KNL1-209ENST00000532347 FAM83AQ86UY5 434 aa9.02□□□□□ -0.97
KNL1-209ENST00000532347 DNERQ8NFT8 737 aa9.02□□□□□ -0.97
KNL1-209ENST00000532347 ST8SIA2Q92186 375 aa9.02□□□□□ -0.97
KNL1-209ENST00000532347 B3GNT5Q9BYG0 378 aa9.02□□□□□ -0.97
KNL1-209ENST00000532347 C11orf54Q9H0W9 315 aaPredicted RBP9.02□□□□□ -0.97
KNL1-209ENST00000532347 FAM204AQ9H8W3 233 aa9.02□□□□□ -0.97
KNL1-209ENST00000532347 LMBRD1Q9NUN5 540 aa9.02□□□□□ -0.97
KNL1-209ENST00000532347 HYPKQ9NX55 129 aa9.02□□□□□ -0.97
KNL1-209ENST00000532347 HECAQ9UBI9 543 aaPredicted RBP9.02□□□□□ -0.97
KNL1-209ENST00000532347 DBF4Q9UBU7 674 aaPredicted RBP9.02□□□□□ -0.97
KNL1-209ENST00000532347 ABCF2Q9UG63 623 aa9.02□□□□□ -0.97
KNL1-209ENST00000532347 POLLQ9UGP5 575 aa9.02□□□□□ -0.97
KNL1-209ENST00000532347 HDAC5Q9UQL6 1122 aa9.02□□□□□ -0.97
KNL1-209ENST00000532347 MANSC4A6NHS7 340 aaPredicted RBP9.01□□□□□ -0.97
KNL1-209ENST00000532347 ADM5C9JUS6 153 aa9.01□□□□□ -0.97
KNL1-209ENST00000532347 FAM227AF5H4B4 570 aa9.01□□□□□ -0.97
KNL1-209ENST00000532347 CAND2O75155 1236 aa9.01□□□□□ -0.97
KNL1-209ENST00000532347 ARIH2O95376 493 aa9.01□□□□□ -0.97
KNL1-209ENST00000532347 CAPN2P17655 700 aa9.01□□□□□ -0.97
KNL1-209ENST00000532347 TAF1P21675 1872 aa9.01□□□□□ -0.97
KNL1-209ENST00000532347 SMARCA1P28370 1054 aa9.01□□□□□ -0.97
KNL1-209ENST00000532347 CLRN1P58418 232 aa9.01□□□□□ -0.97
KNL1-209ENST00000532347 HLTFQ14527 1009 aaKnown RBP eCLIP9.01□□□□□ -0.97
KNL1-209ENST00000532347 ARHGEF6Q15052 776 aa9.01□□□□□ -0.97
KNL1-209ENST00000532347 BMT2Q1RMZ1 405 aa9.01□□□□□ -0.97
KNL1-209ENST00000532347 DACT2Q5SW24 774 aa9.01□□□□□ -0.97
KNL1-209ENST00000532347 SEM1Q6ZVN7 128 aa9.01□□□□□ -0.97
KNL1-209ENST00000532347 GPRIN1Q7Z2K8 1008 aa9.01□□□□□ -0.97
KNL1-209ENST00000532347 C20orf173Q96LM9 149 aa9.01□□□□□ -0.97
KNL1-209ENST00000532347 BDH2Q9BUT1 245 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms