RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 PI4K2AQ9BTU6 479 aa12.44□□□□□ -0.42
CMTM1-215ENST00000531885 CCSER1Q9C0I3 900 aa12.44□□□□□ -0.42
CMTM1-215ENST00000531885 ABCB6Q9NP58 842 aa12.44□□□□□ -0.42
CMTM1-215ENST00000531885 ANK1P16157 1881 aa12.44□□□□□ -0.42
CMTM1-215ENST00000531885 DENND4CQ5VZ89 1909 aa12.43□□□□□ -0.42
CMTM1-215ENST00000531885 OTOL1A6NHN0 477 aaPredicted RBP12.43□□□□□ -0.42
CMTM1-215ENST00000531885 HMGA1P17096 107 aaKnown RBP12.43□□□□□ -0.42
CMTM1-215ENST00000531885 HOXC13P31276 330 aa12.43□□□□□ -0.42
CMTM1-215ENST00000531885 POSTNQ15063 836 aa12.43□□□□□ -0.42
CMTM1-215ENST00000531885 ARSHQ5FYA8 562 aa12.43□□□□□ -0.42
CMTM1-215ENST00000531885 SH3PXD2AQ5TCZ1 1133 aa12.43□□□□□ -0.42
CMTM1-215ENST00000531885 SPATA2LQ8IUW3 424 aaPredicted RBP12.43□□□□□ -0.42
CMTM1-215ENST00000531885 KRI1Q8N9T8 703 aaKnown RBP12.43□□□□□ -0.42
CMTM1-215ENST00000531885 CACTINQ8WUQ7 758 aaKnown RBP12.43□□□□□ -0.42
CMTM1-215ENST00000531885 LEO1Q8WVC0 666 aaPredicted RBP12.43□□□□□ -0.42
CMTM1-215ENST00000531885 POMGNT1Q8WZA1 660 aa12.43□□□□□ -0.42
CMTM1-215ENST00000531885 CHFRQ96EP1 664 aa12.43□□□□□ -0.42
CMTM1-215ENST00000531885 SPACA7Q96KW9 195 aa12.43□□□□□ -0.42
CMTM1-215ENST00000531885 SCN1AP35498 2009 aa12.43□□□□□ -0.42
CMTM1-215ENST00000531885 ZZEF1O43149 2961 aa12.43□□□□□ -0.42
CMTM1-215ENST00000531885 EML5Q05BV3 1969 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 LNP1A1A4G5 178 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 DCLK1O15075 740 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 CEACAM1P13688 526 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 PCSK1P29120 753 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 RDXP35241 583 aaKnown RBP12.42□□□□□ -0.42
CMTM1-215ENST00000531885 DPP6P42658 865 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 ZNF131P52739 623 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 GTF2BQ00403 316 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 LMAN2Q12907 356 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 TMEM150AQ86TG1 271 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 LRRTM3Q86VH5 581 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 TTC30AQ86WT1 665 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 TMEM86AQ8N2M4 240 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 TRMT2BQ96GJ1 504 aaKnown RBP12.42□□□□□ -0.42
CMTM1-215ENST00000531885 ACBD6Q9BR61 282 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 NUSAP1Q9BXS6 441 aaKnown RBP12.42□□□□□ -0.42
CMTM1-215ENST00000531885 ADAM33Q9BZ11 813 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 SLC32A1Q9H598 525 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 FBRSL1Q9HCM7 1045 aaKnown RBP12.42□□□□□ -0.42
CMTM1-215ENST00000531885 DDX43Q9NXZ2 648 aaKnown RBP12.42□□□□□ -0.42
CMTM1-215ENST00000531885 EHD2Q9NZN4 543 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 ZMIZ1Q9ULJ6 1067 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 CIZ1Q9ULV3 898 aaPredicted RBP12.42□□□□□ -0.42
CMTM1-215ENST00000531885 EXOC7Q9UPT5 735 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 ATRXP46100 2492 aa12.42□□□□□ -0.42
CMTM1-215ENST00000531885 SPEGQ15772 3267 aa12.41□□□□□ -0.42
CMTM1-215ENST00000531885 MAP3K13O43283 966 aa12.41□□□□□ -0.42
CMTM1-215ENST00000531885 NOL4O94818 638 aa12.41□□□□□ -0.42
CMTM1-215ENST00000531885 BMP15O95972 392 aa12.41□□□□□ -0.42
CMTM1-215ENST00000531885 CSRP1P21291 193 aaKnown RBP12.41□□□□□ -0.42
CMTM1-215ENST00000531885 DHPSP49366 369 aaPredicted RBP12.41□□□□□ -0.42
CMTM1-215ENST00000531885 TFAMQ00059 246 aaKnown RBP12.41□□□□□ -0.42
CMTM1-215ENST00000531885 USP4Q13107 963 aa12.41□□□□□ -0.42
CMTM1-215ENST00000531885 BYSLQ13895 437 aaKnown RBP12.41□□□□□ -0.42
CMTM1-215ENST00000531885 ZNF77Q15935 545 aa12.41□□□□□ -0.42
CMTM1-215ENST00000531885 DDR2Q16832 855 aa12.41□□□□□ -0.42
CMTM1-215ENST00000531885 UAP1L1Q3KQV9 507 aa12.41□□□□□ -0.42
CMTM1-215ENST00000531885 PMS2CLQ68D20 193 aa12.41□□□□□ -0.42
CMTM1-215ENST00000531885 ANO7Q6IWH7 933 aa12.41□□□□□ -0.42
CMTM1-215ENST00000531885 C4orf50Q6ZRC1 276 aa12.41□□□□□ -0.42
CMTM1-215ENST00000531885 SCN4BQ8IWT1 228 aa12.41□□□□□ -0.42
CMTM1-215ENST00000531885 NUP205Q92621 2012 aa12.41□□□□□ -0.42
CMTM1-215ENST00000531885 HVCN1Q96D96 273 aa12.41□□□□□ -0.42
CMTM1-215ENST00000531885 TPSD1Q9BZJ3 242 aa12.41□□□□□ -0.42
CMTM1-215ENST00000531885 WNT6Q9Y6F9 365 aa12.41□□□□□ -0.42
CMTM1-215ENST00000531885 THADAQ6YHU6 1953 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 MYMKA6NI61 221 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 C1QTNF9BB2RNN3 333 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 LDHAP00338 332 aaKnown RBP12.4□□□□□ -0.42
CMTM1-215ENST00000531885 C1QTNF9P0C862 333 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 HDCP19113 662 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 CYP2F1P24903 491 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 ANXA13P27216 316 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 POLR2BP30876 1174 aaKnown RBP12.4□□□□□ -0.42
CMTM1-215ENST00000531885 LHX1P48742 406 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 GPR15P49685 360 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 ATXN3P54252 364 aaPredicted RBP12.4□□□□□ -0.42
CMTM1-215ENST00000531885 SEC13P55735 322 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 MCM6Q14566 821 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 EML3Q32P44 896 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 C2orf27AQ580R0 203 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 INTS6LQ5JSJ4 861 aaKnown RBP12.4□□□□□ -0.42
CMTM1-215ENST00000531885 SDHAF4Q5VUM1 108 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 SLC39A4Q6P5W5 647 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 LPCAT2Q7L5N7 544 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 EFCAB13Q8IY85 973 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 PDCL2Q8N4E4 241 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 LRRC52Q8N7C0 313 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 KDF1Q8NAX2 398 aaPredicted RBP12.4□□□□□ -0.42
CMTM1-215ENST00000531885 SPATA18Q8TC71 538 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 SH3RF2Q8TEC5 729 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 LARP4BQ92615 738 aaKnown RBP12.4□□□□□ -0.42
CMTM1-215ENST00000531885 PIGKQ92643 395 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 RAD54LQ92698 747 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 FUBP3Q96I24 572 aaKnown RBP eCLIP12.4□□□□□ -0.42
CMTM1-215ENST00000531885 CNOT6LQ96LI5 555 aaKnown RBP12.4□□□□□ -0.42
CMTM1-215ENST00000531885 MYRFLQ96LU7 910 aa12.4□□□□□ -0.42
CMTM1-215ENST00000531885 POLMQ9NP87 494 aaPredicted RBP12.4□□□□□ -0.42
CMTM1-215ENST00000531885 POLR3BQ9NW08 1133 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms