RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 EFCAB12Q6NXP0 572 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 USP17L6PQ6QN14 398 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 MED25Q71SY5 747 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 TMPRSS9Q7Z410 1059 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 CCDC28AQ8IWP9 274 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 SP8Q8IXZ3 490 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 PSD4Q8NDX1 1056 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 NSUN7Q8NE18 718 aaKnown RBP3.51□□□□□ -1.85
CD44-234ENST00000531873 MDGA1Q8NFP4 955 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 FEZF2Q8TBJ5 459 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 ST8SIA2Q92186 375 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 RILPL2Q969X0 211 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 EID2BQ96D98 161 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 SNX27Q96L92 541 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 TBATAQ96M53 351 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 SENP7Q9BQF6 1050 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 PCDHAC1Q9H158 963 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 MLXIPQ9HAP2 919 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 SPON1Q9HCB6 807 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 GGA3Q9NZ52 723 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 CTTNBP2NLQ9P2B4 639 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 HSFX1Q9UBD0 423 aa3.51□□□□□ -1.85
CD44-234ENST00000531873 HECAQ9UBI9 543 aaPredicted RBP3.51□□□□□ -1.85
CD44-234ENST00000531873 ZMYND8Q9ULU4 1186 aaPredicted RBP3.51□□□□□ -1.85
CD44-234ENST00000531873 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 A0A0B4J269 797 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 RRN3P2A6NIE6 340 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 TISP43B9A030 160 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 B9A039 149 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 PRRT4C9JH25 899 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 OVOL3O00110 214 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 LEFTY2O00292 366 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 POLRMTO00411 1230 aaKnown RBP3.5□□□□□ -1.85
CD44-234ENST00000531873 PYGLP06737 847 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 ARP10275 920 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 CYP2C9P11712 490 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 CKMT1AP12532 417 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 NPPBP16860 134 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 RPS19P39019 145 aaKnown RBP3.5□□□□□ -1.85
CD44-234ENST00000531873 PTDSS1P48651 473 aaKnown RBP3.5□□□□□ -1.85
CD44-234ENST00000531873 LILRA4P59901 499 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 PPP2CBP62714 309 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 PPP2CAP67775 309 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 MC2RQ01718 297 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 LMOD3Q0VAK6 560 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 KIAA2012Q0VF49 1180 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 FOXL1Q12952 345 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 MAPRE1Q15691 268 aaKnown RBP3.5□□□□□ -1.85
CD44-234ENST00000531873 ELAVL1Q15717 326 aaKnown RBP3.5□□□□□ -1.85
CD44-234ENST00000531873 MAPKAPK3Q16644 382 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 TIGD6Q17RP2 521 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 SLC5A9Q2M3M2 681 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 ZNF750Q32MQ0 723 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 AMOTQ4VCS5 1084 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 DCAF17Q5H9S7 520 aaPredicted RBP3.5□□□□□ -1.85
CD44-234ENST00000531873 METTL24Q5JXM2 366 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 FAM102AQ5T9C2 384 aaPredicted RBP3.5□□□□□ -1.85
CD44-234ENST00000531873 AGAP9Q5VTM2 703 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 TAPT1Q6NXT6 567 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 TAF2Q6P1X5 1199 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 ARHGEF18Q6ZSZ5 1173 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 PLEKHH3Q7Z736 793 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 FAM124AQ86V42 546 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 MB21D1Q8N884 522 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 SIMC1Q8NDZ2 872 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 OTUD7AQ8TE49 926 aaPredicted RBP3.5□□□□□ -1.85
CD44-234ENST00000531873 ZNF483Q8TF39 744 aaPredicted RBP3.5□□□□□ -1.85
CD44-234ENST00000531873 TRIM63Q969Q1 353 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 MARS2Q96GW9 593 aaKnown RBP3.5□□□□□ -1.85
CD44-234ENST00000531873 MPP4Q96JB8 637 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 GNRHR2Q96P88 292 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 OR14A2Q96R54 314 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 TRIB1Q96RU8 372 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 PAGR1Q9BTK6 254 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 SMOC2Q9H3U7 446 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 VPS45Q9NRW7 570 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 PLA2G3Q9NZ20 509 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 LPAR3Q9UBY5 353 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 HDAC5Q9UQL6 1122 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 DTNAQ9Y4J8 743 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 HS3ST4Q9Y661 456 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 CDY1Q9Y6F8 540 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 SLC30A1Q9Y6M5 507 aa3.5□□□□□ -1.85
CD44-234ENST00000531873 OR2W5A6NFC9 320 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 IRAK2O43187 625 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 DHHO43323 396 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 FAM155BO75949 473 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 IPO13O94829 963 aaKnown RBP3.49□□□□□ -1.85
CD44-234ENST00000531873 RHOBTB3O94955 611 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 INMTO95050 263 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 FAM163BP0C2L3 166 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 XRCC6P12956 609 aaKnown RBP eCLIP3.49□□□□□ -1.85
CD44-234ENST00000531873 GYS1P13807 737 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 TPH1P17752 444 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 HK1P19367 917 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 MGAT1P26572 445 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 ATICP31939 592 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 MSX2P35548 267 aaPredicted RBP3.49□□□□□ -1.85
CD44-234ENST00000531873 KCNC1P48547 511 aa3.49□□□□□ -1.85
CD44-234ENST00000531873 RABGGTBP53611 331 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms