RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 EXOC7Q9UPT5 735 aa16.05■□□□□ 0.16
CAPN1-219ENST00000530495 ANAPC1Q9H1A4 1944 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 HUS1O60921 280 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 LDHAP00338 332 aaKnown RBP16.04■□□□□ 0.16
CAPN1-219ENST00000530495 ITGB3P05106 788 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 POLR2BP30876 1174 aaKnown RBP16.04■□□□□ 0.16
CAPN1-219ENST00000530495 MYL7Q01449 175 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 FAM160A1Q05DH4 1040 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 INTS6LQ5JSJ4 861 aaKnown RBP16.04■□□□□ 0.16
CAPN1-219ENST00000530495 L1TD1Q5T7N2 865 aaKnown RBP16.04■□□□□ 0.16
CAPN1-219ENST00000530495 N4BP2L1Q5TBK1 243 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-219ENST00000530495 STPG1Q5TH74 334 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 SDHAF4Q5VUM1 108 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 SCARA3Q6AZY7 606 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 SYT13Q7L8C5 426 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 CPA6Q8N4T0 437 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 LRRC52Q8N7C0 313 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 SPATA18Q8TC71 538 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 OSCP1Q8WVF1 389 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 CHAMP1Q96JM3 812 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 ACCSQ96QU6 501 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 CYP2S1Q96SQ9 504 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 TMEM206Q9H813 350 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 ECT2Q9H8V3 914 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 MRPL44Q9H9J2 332 aaKnown RBP16.04■□□□□ 0.16
CAPN1-219ENST00000530495 POLR3BQ9NW08 1133 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-219ENST00000530495 DUS2Q9NX74 493 aaKnown RBP16.04■□□□□ 0.16
CAPN1-219ENST00000530495 CCDC39Q9UFE4 941 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 GTF3C4Q9UKN8 822 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-219ENST00000530495 SDK1Q7Z5N4 2213 aa16.04■□□□□ 0.16
CAPN1-219ENST00000530495 MYMKA6NI61 221 aa16.03■□□□□ 0.16
CAPN1-219ENST00000530495 GABRDO14764 452 aa16.03■□□□□ 0.16
CAPN1-219ENST00000530495 TADA3O75528 432 aa16.03■□□□□ 0.16
CAPN1-219ENST00000530495 USP17L7P0C7H9 530 aa16.03■□□□□ 0.16
CAPN1-219ENST00000530495 GAP43P17677 238 aa16.03■□□□□ 0.16
CAPN1-219ENST00000530495 GARTP22102 1010 aa16.03■□□□□ 0.16
CAPN1-219ENST00000530495 ACAT1P24752 427 aaKnown RBP16.03■□□□□ 0.16
CAPN1-219ENST00000530495 MTF1Q14872 753 aa16.03■□□□□ 0.16
CAPN1-219ENST00000530495 PLK5Q496M5 336 aa16.03■□□□□ 0.16
CAPN1-219ENST00000530495 CFAP221Q4G0U5 840 aa16.03■□□□□ 0.16
CAPN1-219ENST00000530495 NAIF1Q69YI7 327 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-219ENST00000530495 BRSK2Q8IWQ3 736 aa16.03■□□□□ 0.16
CAPN1-219ENST00000530495 CSGALNACT2Q8N6G5 542 aa16.03■□□□□ 0.16
CAPN1-219ENST00000530495 ZSWIM2Q8NEG5 633 aa16.03■□□□□ 0.16
CAPN1-219ENST00000530495 EZH1Q92800 747 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-219ENST00000530495 DNAJC19Q96DA6 116 aa16.03■□□□□ 0.16
CAPN1-219ENST00000530495 SLC22A12Q96S37 553 aa16.03■□□□□ 0.16
CAPN1-219ENST00000530495 DUSP15Q9H1R2 295 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-219ENST00000530495 VPS45Q9NRW7 570 aa16.03■□□□□ 0.16
CAPN1-219ENST00000530495 EBF1Q9UH73 591 aa16.03■□□□□ 0.16
CAPN1-219ENST00000530495 ITGA11Q9UKX5 1188 aa16.03■□□□□ 0.16
CAPN1-219ENST00000530495 MYO16Q9Y6X6 1858 aa16.03■□□□□ 0.16
CAPN1-219ENST00000530495 TRAV19A0A0A6YYK7 116 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 PMLP29590 882 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 MPLP40238 635 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 LHX1P48742 406 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 RBP5P82980 135 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 ZNF77Q15935 545 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 FAM171BQ6P995 826 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 SV2BQ7L1I2 683 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 TOP6BLQ8N6T0 577 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 RPLP0P6Q8NHW5 317 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 CD101Q93033 1021 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 ATP2A3Q93084 1043 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 SAAL1Q96ER3 474 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 FUBP3Q96I24 572 aaKnown RBP eCLIP16.02■□□□□ 0.16
CAPN1-219ENST00000530495 HHIPQ96QV1 700 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 LSM14BQ9BX40 385 aaKnown RBP16.02■□□□□ 0.16
CAPN1-219ENST00000530495 OLFML3Q9NRN5 406 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 RBAKQ9NYW8 714 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-219ENST00000530495 TBC1D7Q9P0N9 293 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 GCNT4Q9P109 453 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 ANGPTL2Q9UKU9 493 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 PCDHB13Q9Y5F0 798 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 CLIC4Q9Y696 253 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 KIAA1549LQ6ZVL6 1849 aa16.02■□□□□ 0.16
CAPN1-219ENST00000530495 MAP1BP46821 2468 aaKnown RBP16.01■□□□□ 0.15
CAPN1-219ENST00000530495 TULP1O00294 542 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-219ENST00000530495 RHOBTB1O94844 696 aa16.01■□□□□ 0.15
CAPN1-219ENST00000530495 APBB3O95704 486 aa16.01■□□□□ 0.15
CAPN1-219ENST00000530495 TCF3P15923 654 aa16.01■□□□□ 0.15
CAPN1-219ENST00000530495 PCSK1P29120 753 aa16.01■□□□□ 0.15
CAPN1-219ENST00000530495 MAGEA11P43364 429 aa16.01■□□□□ 0.15
CAPN1-219ENST00000530495 SHC2P98077 582 aa16.01■□□□□ 0.15
CAPN1-219ENST00000530495 DMC1Q14565 340 aa16.01■□□□□ 0.15
CAPN1-219ENST00000530495 SOWAHAQ2M3V2 549 aa16.01■□□□□ 0.15
CAPN1-219ENST00000530495 EML3Q32P44 896 aa16.01■□□□□ 0.15
CAPN1-219ENST00000530495 RRAGBQ5VZM2 374 aa16.01■□□□□ 0.15
CAPN1-219ENST00000530495 DPH6Q7L8W6 267 aa16.01■□□□□ 0.15
CAPN1-219ENST00000530495 OSTM1Q86WC4 334 aa16.01■□□□□ 0.15
CAPN1-219ENST00000530495 SPATA2LQ8IUW3 424 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-219ENST00000530495 ARL14EPQ8N8R7 260 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-219ENST00000530495 FSIP1Q8NA03 581 aa16.01■□□□□ 0.15
CAPN1-219ENST00000530495 TRPC7Q9HCX4 862 aa16.01■□□□□ 0.15
CAPN1-219ENST00000530495 SIX4Q9UIU6 781 aa16.01■□□□□ 0.15
CAPN1-219ENST00000530495 FBXO2Q9UK22 296 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-219ENST00000530495 SRPRBQ9Y5M8 271 aaKnown RBP16.01■□□□□ 0.15
CAPN1-219ENST00000530495 SNX9Q9Y5X1 595 aa16.01■□□□□ 0.15
CAPN1-219ENST00000530495 WNT6Q9Y6F9 365 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms