RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 RPL21P46778 160 aaKnown RBP15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 PMS2P54278 862 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 KRT17Q04695 432 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 ZNF252P-AS1Q0IIN9 211 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 SV2CQ496J9 727 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 GNASQ5JWF2 1037 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 FBXO47Q5MNV8 452 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 CEP85LQ5SZL2 805 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 UBXN11Q5T124 520 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 CYP4A22Q5TCH4 519 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 AGBL2Q5U5Z8 902 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 ZDHHC24Q6UX98 284 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 SPOCD1Q6ZMY3 1216 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 ZNF365Q70YC5 407 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 CRYBG2Q8N1P7 616 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 RIN2Q8WYP3 895 aaPredicted RBP15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 SNF8Q96H20 258 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 ATP6V1G3Q96LB4 118 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 PABPC3Q9H361 631 aaKnown RBP15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 TMBIM4Q9HC24 238 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 GTF2IRD1Q9UHL9 959 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 CYTH4Q9UIA0 394 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 TRPV2Q9Y5S1 764 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 NFS1Q9Y697 457 aa15.56■□□□□ 0.08
ECHDC1-220ENST00000528402 KPNA7A9QM74 516 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 GOLGA8SH3BPF8 625 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 SEPT4O43236 478 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 ERBB2P04626 1255 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 RARBP10826 455 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 LRPAP1P30533 357 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 PSMC4P43686 418 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 KCNJ1P48048 391 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 LMAN1P49257 510 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 TAF6P49848 677 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 ZNF143P52747 638 aaPredicted RBP15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 MRPS6P82932 125 aaKnown RBP15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 SKOR1P84550 965 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 OGDHQ02218 1023 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 HIC1Q14526 733 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 UAP1Q16222 522 aaPredicted RBP15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 TRMT10CQ7L0Y3 403 aaKnown RBP15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 LIMS2Q7Z4I7 341 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 TMEM110Q86TL2 294 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 HOOK3Q86VS8 718 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 SESTD1Q86VW0 696 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 FBXO25Q8TCJ0 367 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 RNF25Q96BH1 459 aaPredicted RBP15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 CNPY3Q9BT09 278 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 TRAIPQ9BWF2 469 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 SLC4A5Q9BY07 1137 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 CHST7Q9NS84 486 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 SLC38A7Q9NVC3 462 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 HMGXB4Q9UGU5 601 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 TSPAN16Q9UKR8 245 aa15.55■□□□□ 0.08
ECHDC1-220ENST00000528402 SCN10AQ9Y5Y9 1956 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 SCN1AP35498 2009 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 PAX3P23760 479 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 ACADSBP45954 432 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 TAZQ16635 292 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 PKDCCQ504Y2 493 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 LEKR1Q6ZMV7 388 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 ARCQ7LC44 396 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 VSIG1Q86XK7 387 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 TOP6BLQ8N6T0 577 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 OR6B3Q8NGW1 331 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 TNIP3Q96KP6 325 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 TMEM109Q9BVC6 243 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 HEMGNQ9BXL5 484 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 SNX25Q9H3E2 840 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 NXF3Q9H4D5 531 aaKnown RBP15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 ASIC3Q9UHC3 531 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 ATP8A1Q9Y2Q0 1164 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 PTPN22Q9Y2R2 807 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 IPPQ9Y573 584 aa15.54■□□□□ 0.08
ECHDC1-220ENST00000528402 hCG_1818297A0A087WSY0 165 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 A8MXQ7 604 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 DPYSL4O14531 572 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 GPR182O15218 404 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 RPS6KA5O75582 802 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 GJB6O95452 261 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 KRT14P02533 472 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 ATF2P15336 505 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 CAPN2P17655 700 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 GPD1P21695 349 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 RDXP35241 583 aaKnown RBP15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 FLT3P36888 993 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 GNL1P36915 607 aaPredicted RBP15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 CDKN2BP42772 138 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 GYS2P54840 703 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 ZNF200P98182 395 aaPredicted RBP15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 SLC25A11Q02978 314 aaKnown RBP15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 IFFO1Q0D2I5 559 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 BYSLQ13895 437 aaKnown RBP15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 GOLGA7BQ2TAP0 167 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 TTMPQ5BVD1 217 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 FAM102AQ5T9C2 384 aaPredicted RBP15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 DENND2CQ68D51 928 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 OR6B2Q6IFH4 312 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 MFSD7Q6UXD7 560 aa15.53■□□□□ 0.08
ECHDC1-220ENST00000528402 TRPV1Q8NER1 839 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms