RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 CCDC105Q8IYK2 499 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 DTWD2Q8NBA8 298 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 TTC16Q8NEE8 873 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 PJA1Q8NG27 643 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 DEPDC1BQ8WUY9 529 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 RSPRY1Q96DX4 576 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 EEF2KMTQ96G04 330 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 SMG9Q9H0W8 520 aaKnown RBP16.6■□□□□ 0.25
CAPN1-213ENST00000527897 DPEP3Q9H4B8 488 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 TASP1Q9H6P5 420 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 SMYD3Q9H7B4 428 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 RMND1Q9NWS8 449 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 TRAF3IP3Q9Y228 551 aa16.6■□□□□ 0.25
CAPN1-213ENST00000527897 NUP210Q8TEM1 1887 aaPredicted RBP16.59■□□□□ 0.25
CAPN1-213ENST00000527897 KANSL1LA0AUZ9 987 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 SLC38A8A6NNN8 435 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 TACC1O75410 805 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 AKAP3O75969 853 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 SMC2O95347 1197 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 VNN1O95497 513 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 C4BPAP04003 597 aaKnown RBP16.59■□□□□ 0.25
CAPN1-213ENST00000527897 TRIM49P0CI25 452 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 TRIM49CP0CI26 452 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 KRT13P13646 458 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 HMGA1P17096 107 aaKnown RBP16.59■□□□□ 0.25
CAPN1-213ENST00000527897 RPL13P26373 211 aaKnown RBP16.59■□□□□ 0.25
CAPN1-213ENST00000527897 GRIK1P39086 918 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 PIK3CAP42336 1068 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 VAMP7P51809 220 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 ADAM9Q13443 819 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 MAPRE1Q15691 268 aaKnown RBP16.59■□□□□ 0.25
CAPN1-213ENST00000527897 CFAP221Q4G0U5 840 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 FAM171BQ6P995 826 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 FAM186BQ8IYM0 893 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 MAB21L3Q8N8X9 362 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 TMC2Q8TDI7 906 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 IRF7Q92985 503 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 SMARCE1Q969G3 411 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 FUBP3Q96I24 572 aaKnown RBP eCLIP16.59■□□□□ 0.25
CAPN1-213ENST00000527897 MKNK1Q9BUB5 465 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 XYLT2Q9H1B5 865 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 TRPV4Q9HBA0 871 aa16.59■□□□□ 0.25
CAPN1-213ENST00000527897 HOOK1Q9UJC3 728 aaKnown RBP16.59■□□□□ 0.25
CAPN1-213ENST00000527897 MTF2Q9Y483 593 aaPredicted RBP16.59■□□□□ 0.25
CAPN1-213ENST00000527897 DENND4CQ5VZ89 1909 aa16.58■□□□□ 0.25
CAPN1-213ENST00000527897 FAM170BA6NMN3 283 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 PRAMEF12O95522 483 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 STAU1O95793 577 aaKnown RBP16.58■□□□□ 0.24
CAPN1-213ENST00000527897 PTPN1P18031 435 aaKnown RBP16.58■□□□□ 0.24
CAPN1-213ENST00000527897 ANXA13P27216 316 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 NLRP12P59046 1061 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 CLDN10P78369 228 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 ANGPT1Q15389 498 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 ISM2Q6H9L7 571 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 ENGASEQ8NFI3 743 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 TTC8Q8TAM2 541 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 MYCBPAPQ8TBZ2 947 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 CSGALNACT1Q8TDX6 532 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 MRPS31Q92665 395 aaKnown RBP16.58■□□□□ 0.24
CAPN1-213ENST00000527897 DNASE1L2Q92874 299 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 E2F7Q96AV8 911 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 PCED1BQ96HM7 432 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 SLC46A2Q9BY10 475 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 IRF2BPLQ9H1B7 796 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 TRPC7Q9HCX4 862 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 NDRG2Q9UN36 371 aaKnown RBP16.58■□□□□ 0.24
CAPN1-213ENST00000527897 NME7Q9Y5B8 376 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 OBSL1O75147 1896 aa16.58■□□□□ 0.24
CAPN1-213ENST00000527897 HLA-DRAP01903 254 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 F11P03951 625 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 P4HA1P13674 534 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 PSMC2P35998 433 aaKnown RBP16.57■□□□□ 0.24
CAPN1-213ENST00000527897 AVPR1AP37288 418 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 PRCPP42785 496 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 MAGEA11P43364 429 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 GCLMP48507 274 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 MRE11P49959 708 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 ZACNQ401N2 412 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 TXNDC8Q6A555 127 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 SPOPLQ6IQ16 392 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 ZNF852Q6ZMS4 543 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 INTS8Q75QN2 995 aaKnown RBP16.57■□□□□ 0.24
CAPN1-213ENST00000527897 SV2AQ7L0J3 742 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 TMEM150AQ86TG1 271 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 TMEM174Q8WUU8 243 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 ZFYVE19Q96K21 471 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 MED10Q9BTT4 135 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 LTB4R2Q9NPC1 389 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 UXTQ9UBK9 157 aaPredicted RBP16.57■□□□□ 0.24
CAPN1-213ENST00000527897 PCDHA5Q9Y5H7 936 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 PIAS3Q9Y6X2 628 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 PTPRDP23468 1912 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 VPS13AQ96RL7 3174 aa16.57■□□□□ 0.24
CAPN1-213ENST00000527897 CLDN5O00501 218 aa16.56■□□□□ 0.24
CAPN1-213ENST00000527897 KINO60870 393 aaKnown RBP16.56■□□□□ 0.24
CAPN1-213ENST00000527897 NOL4O94818 638 aa16.56■□□□□ 0.24
CAPN1-213ENST00000527897 GLULP15104 373 aa16.56■□□□□ 0.24
CAPN1-213ENST00000527897 HOXD11P31277 338 aaPredicted RBP16.56■□□□□ 0.24
CAPN1-213ENST00000527897 KPNA1P52294 538 aaPredicted RBP16.56■□□□□ 0.24
CAPN1-213ENST00000527897 IFRD2Q12894 506 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms