RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 LAMTOR5O43504 91 aa20.62■□□□□ 0.89
CAPN1-211ENST00000527739 HMGA1P17096 107 aaKnown RBP20.62■□□□□ 0.89
CAPN1-211ENST00000527739 WARSP23381 471 aaKnown RBP20.62■□□□□ 0.89
CAPN1-211ENST00000527739 MYL6P60660 151 aa20.62■□□□□ 0.89
CAPN1-211ENST00000527739 FOXK2Q01167 660 aa20.62■□□□□ 0.89
CAPN1-211ENST00000527739 CYP27A1Q02318 531 aa20.62■□□□□ 0.89
CAPN1-211ENST00000527739 C4orf50Q6ZRC1 276 aa20.62■□□□□ 0.89
CAPN1-211ENST00000527739 MAB21L3Q8N8X9 362 aa20.62■□□□□ 0.89
CAPN1-211ENST00000527739 FAM3CQ92520 227 aa20.62■□□□□ 0.89
CAPN1-211ENST00000527739 MRPS31Q92665 395 aaKnown RBP20.62■□□□□ 0.89
CAPN1-211ENST00000527739 PKMYT1Q99640 499 aa20.62■□□□□ 0.89
CAPN1-211ENST00000527739 MRPL45Q9BRJ2 306 aaKnown RBP20.62■□□□□ 0.89
CAPN1-211ENST00000527739 A0A1W2PQ27 194 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 A0A1W2PQ64 194 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 A0A1W2PQD8 194 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 SLC38A8A6NNN8 435 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 CHADO15335 359 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 KIF20AO95235 890 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 PRAMEF12O95522 483 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 LMNAP02545 664 aaKnown RBP20.61■□□□□ 0.89
CAPN1-211ENST00000527739 F11P03951 625 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 NR3C1P04150 777 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 SP9P0CG40 484 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 AVPR1AP37288 418 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 NLRP12P59046 1061 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 MAPRE1Q15691 268 aaKnown RBP20.61■□□□□ 0.89
CAPN1-211ENST00000527739 CEP135Q66GS9 1140 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 TXNDC8Q6A555 127 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 KRBA2Q6ZNG9 492 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 TTC16Q8NEE8 873 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 MYLPFQ96A32 169 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 ZFYVE19Q96K21 471 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 GOLPH3LQ9H4A5 285 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 THG1LQ9NWX6 298 aaKnown RBP20.61■□□□□ 0.89
CAPN1-211ENST00000527739 MAPK8IP1Q9UQF2 711 aa20.61■□□□□ 0.89
CAPN1-211ENST00000527739 GOLGA6L4A6NEF3 574 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 LRRIQ3A6PVS8 624 aaPredicted RBP20.6■□□□□ 0.89
CAPN1-211ENST00000527739 PDXKO00764 312 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 CALUO43852 315 aaPredicted RBP20.6■□□□□ 0.89
CAPN1-211ENST00000527739 ZNF202O95125 648 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 BDNFP23560 247 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 CCNE1P24864 410 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 GRIK1P39086 918 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 CSTF1Q05048 431 aaKnown RBP20.6■□□□□ 0.89
CAPN1-211ENST00000527739 CFAP221Q4G0U5 840 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 MDH1BQ5I0G3 518 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 FAM171BQ6P995 826 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 LIMS2Q7Z4I7 341 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 MAML2Q8IZL2 1156 aaPredicted RBP20.6■□□□□ 0.89
CAPN1-211ENST00000527739 CMTM8Q8IZV2 173 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 PLEKHO2Q8TD55 490 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 BPIFB1Q8TDL5 484 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 SYAP1Q96A49 352 aaPredicted RBP20.6■□□□□ 0.89
CAPN1-211ENST00000527739 FUBP3Q96I24 572 aaKnown RBP eCLIP20.6■□□□□ 0.89
CAPN1-211ENST00000527739 LRRC3BQ96PB8 259 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 GZF1Q9H116 711 aaPredicted RBP20.6■□□□□ 0.89
CAPN1-211ENST00000527739 KCTD10Q9H3F6 313 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 TRPC7Q9HCX4 862 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 CRTAC1Q9NQ79 661 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 TRPV5Q9NQA5 729 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 DMAC2Q9NW81 257 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 UXTQ9UBK9 157 aaPredicted RBP20.6■□□□□ 0.89
CAPN1-211ENST00000527739 FRMD4BQ9Y2L6 1034 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 EP300Q09472 2414 aaPredicted RBP20.6■□□□□ 0.89
CAPN1-211ENST00000527739 DNAH14Q0VDD8 3507 aa20.6■□□□□ 0.89
CAPN1-211ENST00000527739 FAM237AA0A1B0GTK4 181 aa20.59■□□□□ 0.89
CAPN1-211ENST00000527739 A8MXQ7 604 aa20.59■□□□□ 0.89
CAPN1-211ENST00000527739 ATICP31939 592 aa20.59■□□□□ 0.89
CAPN1-211ENST00000527739 MAGEA9P43362 315 aa20.59■□□□□ 0.89
CAPN1-211ENST00000527739 SOX9P48436 509 aa20.59■□□□□ 0.89
CAPN1-211ENST00000527739 FCHO2Q0JRZ9 810 aa20.59■□□□□ 0.89
CAPN1-211ENST00000527739 ARHGAP29Q52LW3 1261 aa20.59■□□□□ 0.89
CAPN1-211ENST00000527739 TMEM150AQ86TG1 271 aa20.59■□□□□ 0.89
CAPN1-211ENST00000527739 CELF5Q8N6W0 485 aaKnown RBP20.59■□□□□ 0.89
CAPN1-211ENST00000527739 PARD3BQ8TEW8 1205 aa20.59■□□□□ 0.89
CAPN1-211ENST00000527739 CCDC34Q96HJ3 373 aa20.59■□□□□ 0.89
CAPN1-211ENST00000527739 OBP2AQ9NY56 170 aa20.59■□□□□ 0.89
CAPN1-211ENST00000527739 TSC2P49815 1807 aa20.59■□□□□ 0.89
CAPN1-211ENST00000527739 TCHHQ07283 1943 aa20.59■□□□□ 0.89
CAPN1-211ENST00000527739 DMXL1Q9Y485 3027 aa20.58■□□□□ 0.89
CAPN1-211ENST00000527739 TACC1O75410 805 aa20.58■□□□□ 0.89
CAPN1-211ENST00000527739 DDX6P26196 483 aaKnown RBP eCLIP20.58■□□□□ 0.89
CAPN1-211ENST00000527739 ANXA13P27216 316 aa20.58■□□□□ 0.89
CAPN1-211ENST00000527739 AP3M2P53677 418 aa20.58■□□□□ 0.89
CAPN1-211ENST00000527739 DPYDQ12882 1025 aa20.58■□□□□ 0.89
CAPN1-211ENST00000527739 ZNF699Q32M78 642 aa20.58■□□□□ 0.89
CAPN1-211ENST00000527739 TDRD10Q5VZ19 366 aaKnown RBP20.58■□□□□ 0.89
CAPN1-211ENST00000527739 SLC9A9Q8IVB4 645 aa20.58■□□□□ 0.89
CAPN1-211ENST00000527739 KIAA2013Q8IYS2 634 aa20.58■□□□□ 0.89
CAPN1-211ENST00000527739 CLDN23Q96B33 292 aa20.58■□□□□ 0.89
CAPN1-211ENST00000527739 ELMO3Q96BJ8 720 aa20.58■□□□□ 0.89
CAPN1-211ENST00000527739 LMAN1LQ9HAT1 526 aa20.58■□□□□ 0.89
CAPN1-211ENST00000527739 GTSE1Q9NYZ3 720 aa20.58■□□□□ 0.89
CAPN1-211ENST00000527739 ZMYM5Q9UJ78 669 aa20.58■□□□□ 0.89
CAPN1-211ENST00000527739 SHISA7A6NL88 538 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 NOL4O94818 638 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 RHOBTB3O94955 611 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 PTPN1P18031 435 aaKnown RBP20.57■□□□□ 0.88
CAPN1-211ENST00000527739 WEE1P30291 646 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 MAGEA11P43364 429 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms