RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 ERVK-5Q9HDB9 667 aa17.11■□□□□ 0.33
SNRNP35-204ENST00000527158 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.11■□□□□ 0.33
SNRNP35-204ENST00000527158 PADI3Q9ULW8 664 aa17.11■□□□□ 0.33
SNRNP35-204ENST00000527158 UTP11Q9Y3A2 253 aaKnown RBP17.11■□□□□ 0.33
SNRNP35-204ENST00000527158 HUS1O60921 280 aa17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 ERBB2P04626 1255 aa17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 GNL1P36915 607 aaPredicted RBP17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 CETN2P41208 172 aa17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 CARSP49589 748 aaKnown RBP17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 TAS2R40P59535 323 aa17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 DR1Q01658 176 aa17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 CUL1Q13616 776 aa17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 DHX34Q14147 1143 aaKnown RBP17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 GOLGA7BQ2TAP0 167 aa17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 DAB2IPQ5VWQ8 1189 aa17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 XYLT1Q86Y38 959 aa17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 KATNAL2Q8IYT4 538 aa17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 MREGQ8N565 214 aa17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 SLAIN1Q8ND83 568 aa17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 CASKIN2Q8WXE0 1202 aa17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 MAGOHBQ96A72 148 aaKnown RBP17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 RUNDC3BQ96NL0 473 aa17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 HMX1Q9NP08 348 aaPredicted RBP17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 TRMT13Q9NUP7 481 aaKnown RBP17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 HESX1Q9UBX0 185 aa17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 PCNTO95613 3336 aa17.1■□□□□ 0.33
SNRNP35-204ENST00000527158 FSCN2O14926 492 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 SPTLC1O15269 473 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 TTI1O43156 1089 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 INHAP05111 366 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 GHRP10912 638 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 CD52P31358 61 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 LILRA4P59901 499 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 PPP1R26Q5T8A7 1209 aaPredicted RBP17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 CCDC50Q8IVM0 306 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 NIPA2Q8N8Q9 360 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 PRELID2Q8N945 189 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 GDAP1L1Q96MZ0 367 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 TSEN34Q9BSV6 310 aaKnown RBP17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 RAB17Q9H0T7 212 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 NFU1Q9UMS0 254 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 GIT1Q9Y2X7 761 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 FKTNO75072 461 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 THP07101 528 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 RFC1P35251 1148 aaPredicted RBP17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 MLH1P40692 756 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 RAB27AP51159 221 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 SNX16P57768 344 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 DNAJC21Q5F1R6 531 aaKnown RBP17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 LRRC38Q5VT99 294 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 EXD1Q8NHP7 514 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 FNIP1Q8TF40 1166 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 GAD1Q99259 594 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 TJP2Q9UDY2 1190 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 SCN1AP35498 2009 aa17.09■□□□□ 0.33
SNRNP35-204ENST00000527158 THSD7BQ9C0I4 1608 aa17.08■□□□□ 0.33
SNRNP35-204ENST00000527158 FAM187AA6NFU0 413 aa17.08■□□□□ 0.33
SNRNP35-204ENST00000527158 F8VP50 259 aa17.08■□□□□ 0.33
SNRNP35-204ENST00000527158 RARAP10276 462 aa17.08■□□□□ 0.33
SNRNP35-204ENST00000527158 PSMA2P25787 234 aa17.08■□□□□ 0.33
SNRNP35-204ENST00000527158 OGDHQ02218 1023 aa17.08■□□□□ 0.33
SNRNP35-204ENST00000527158 ZNF252P-AS1Q0IIN9 211 aa17.08■□□□□ 0.33
SNRNP35-204ENST00000527158 ODF2Q5BJF6 829 aa17.08■□□□□ 0.33
SNRNP35-204ENST00000527158 FAM26DQ5JW98 314 aa17.08■□□□□ 0.33
SNRNP35-204ENST00000527158 ZFYVE27Q5T4F4 411 aa17.08■□□□□ 0.33
SNRNP35-204ENST00000527158 TOP6BLQ8N6T0 577 aa17.08■□□□□ 0.33
SNRNP35-204ENST00000527158 KBTBD7Q8WVZ9 684 aa17.08■□□□□ 0.33
SNRNP35-204ENST00000527158 MCRS1Q96EZ8 462 aa17.08■□□□□ 0.33
SNRNP35-204ENST00000527158 TRAIPQ9BWF2 469 aa17.08■□□□□ 0.33
SNRNP35-204ENST00000527158 TSPYL2Q9H2G4 693 aaPredicted RBP17.08■□□□□ 0.33
SNRNP35-204ENST00000527158 FAM49BQ9NUQ9 324 aa17.08■□□□□ 0.33
SNRNP35-204ENST00000527158 RASAL2Q9UJF2 1139 aa17.08■□□□□ 0.33
SNRNP35-204ENST00000527158 TCRBV7S2A1N4TA0A589 114 aa17.08■□□□□ 0.32
SNRNP35-204ENST00000527158 MEIS3P2A8K0S8 358 aa17.08■□□□□ 0.32
SNRNP35-204ENST00000527158 CAND2O75155 1236 aa17.08■□□□□ 0.32
SNRNP35-204ENST00000527158 PDGFRBP09619 1106 aa17.08■□□□□ 0.32
SNRNP35-204ENST00000527158 SETSIPP0DME0 302 aa17.08■□□□□ 0.32
SNRNP35-204ENST00000527158 GJC1P36383 396 aa17.08■□□□□ 0.32
SNRNP35-204ENST00000527158 PRMT2P55345 433 aa17.08■□□□□ 0.32
SNRNP35-204ENST00000527158 SKOR1P84550 965 aa17.08■□□□□ 0.32
SNRNP35-204ENST00000527158 HLTFQ14527 1009 aaKnown RBP eCLIP17.08■□□□□ 0.32
SNRNP35-204ENST00000527158 LPIN1Q14693 890 aa17.08■□□□□ 0.32
SNRNP35-204ENST00000527158 CYP1B1Q16678 543 aa17.08■□□□□ 0.32
SNRNP35-204ENST00000527158 ARHGAP17Q68EM7 881 aa17.08■□□□□ 0.32
SNRNP35-204ENST00000527158 MRPL10Q7Z7H8 261 aaKnown RBP17.08■□□□□ 0.32
SNRNP35-204ENST00000527158 RCOR2Q8IZ40 523 aa17.08■□□□□ 0.32
SNRNP35-204ENST00000527158 CRYBG2Q8N1P7 616 aa17.08■□□□□ 0.32
SNRNP35-204ENST00000527158 METTL5Q9NRN9 209 aaKnown RBP17.08■□□□□ 0.32
SNRNP35-204ENST00000527158 PCYOX1Q9UHG3 505 aa17.08■□□□□ 0.32
SNRNP35-204ENST00000527158 ZNF623O75123 536 aa17.07■□□□□ 0.32
SNRNP35-204ENST00000527158 PFKMP08237 780 aa17.07■□□□□ 0.32
SNRNP35-204ENST00000527158 MAGEA9P43362 315 aa17.07■□□□□ 0.32
SNRNP35-204ENST00000527158 CCDC137Q6PK04 289 aaKnown RBP17.07■□□□□ 0.32
SNRNP35-204ENST00000527158 LIMS2Q7Z4I7 341 aa17.07■□□□□ 0.32
SNRNP35-204ENST00000527158 ADGRF2Q8IZF7 708 aa17.07■□□□□ 0.32
SNRNP35-204ENST00000527158 ZDHHC14Q8IZN3 488 aa17.07■□□□□ 0.32
SNRNP35-204ENST00000527158 GSTCDQ8NEC7 633 aa17.07■□□□□ 0.32
SNRNP35-204ENST00000527158 LPPQ93052 612 aa17.07■□□□□ 0.32
SNRNP35-204ENST00000527158 RBM41Q96IZ5 413 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms