RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 TULP1O00294 542 aaPredicted RBP17.31■□□□□ 0.36
PTPRU-210ENST00000527027 HUS1O60921 280 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 TADA3O75528 432 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 PPP1R37O75864 691 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 NOL4O94818 638 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 RHOBTB1O94844 696 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 KCNK5O95279 499 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 APBB3O95704 486 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 USP17L7P0C7H9 530 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 POLR2BP30876 1174 aaKnown RBP17.31■□□□□ 0.36
PTPRU-210ENST00000527027 TFAMQ00059 246 aaKnown RBP17.31■□□□□ 0.36
PTPRU-210ENST00000527027 MYL7Q01449 175 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 ELF2Q15723 593 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 RNF43Q68DV7 783 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 NAIF1Q69YI7 327 aaPredicted RBP17.31■□□□□ 0.36
PTPRU-210ENST00000527027 SFR1Q86XK3 245 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 TMEM86AQ8N2M4 240 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 C1orf127Q8N9H9 656 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 RPLP0P6Q8NHW5 317 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 CACTINQ8WUQ7 758 aaKnown RBP17.31■□□□□ 0.36
PTPRU-210ENST00000527027 CD101Q93033 1021 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 CYP2S1Q96SQ9 504 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 FAM213AQ9BRX8 229 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 STRA6Q9BX79 667 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 TMEM206Q9H813 350 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 TRPC7Q9HCX4 862 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 GTF3C4Q9UKN8 822 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 L1RE1Q9UN81 338 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 FRYQ5TBA9 3013 aa17.31■□□□□ 0.36
PTPRU-210ENST00000527027 GREB1Q4ZG55 1949 aa17.3■□□□□ 0.36
PTPRU-210ENST00000527027 TRAV19A0A0A6YYK7 116 aa17.3■□□□□ 0.36
PTPRU-210ENST00000527027 ITGB3P05106 788 aa17.3■□□□□ 0.36
PTPRU-210ENST00000527027 ACAT1P24752 427 aaKnown RBP17.3■□□□□ 0.36
PTPRU-210ENST00000527027 IFNAR2P48551 515 aa17.3■□□□□ 0.36
PTPRU-210ENST00000527027 WNT7BP56706 349 aa17.3■□□□□ 0.36
PTPRU-210ENST00000527027 DMC1Q14565 340 aa17.3■□□□□ 0.36
PTPRU-210ENST00000527027 ZNF77Q15935 545 aa17.3■□□□□ 0.36
PTPRU-210ENST00000527027 INTS6LQ5JSJ4 861 aaKnown RBP17.3■□□□□ 0.36
PTPRU-210ENST00000527027 LARP1BQ659C4 914 aaKnown RBP17.3■□□□□ 0.36
PTPRU-210ENST00000527027 DYMQ7RTS9 669 aa17.3■□□□□ 0.36
PTPRU-210ENST00000527027 LRRC52Q8N7C0 313 aa17.3■□□□□ 0.36
PTPRU-210ENST00000527027 EZH1Q92800 747 aaPredicted RBP17.3■□□□□ 0.36
PTPRU-210ENST00000527027 ATP2A3Q93084 1043 aa17.3■□□□□ 0.36
PTPRU-210ENST00000527027 ACDQ96AP0 544 aa17.3■□□□□ 0.36
PTPRU-210ENST00000527027 SLC22A12Q96S37 553 aa17.3■□□□□ 0.36
PTPRU-210ENST00000527027 PKMYT1Q99640 499 aa17.3■□□□□ 0.36
PTPRU-210ENST00000527027 SEL1LQ9UBV2 794 aa17.3■□□□□ 0.36
PTPRU-210ENST00000527027 EXOC7Q9UPT5 735 aa17.3■□□□□ 0.36
PTPRU-210ENST00000527027 SPAG17Q6Q759 2223 aa17.3■□□□□ 0.36
PTPRU-210ENST00000527027 KIF26AQ9ULI4 1882 aaPredicted RBP17.3■□□□□ 0.36
PTPRU-210ENST00000527027 ANK1P16157 1881 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 ATG2BQ96BY7 2078 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 DCLK1O15075 740 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 LDHAP00338 332 aaKnown RBP17.29■□□□□ 0.36
PTPRU-210ENST00000527027 CKMP06732 381 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 LHX1P48742 406 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 KCNA1Q09470 495 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 NR1H3Q13133 447 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 PSMD2Q13200 908 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 SF3A1Q15459 793 aaKnown RBP17.29■□□□□ 0.36
PTPRU-210ENST00000527027 EML3Q32P44 896 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 CFAP221Q4G0U5 840 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 TCEAL6Q6IPX3 200 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 BRSK2Q8IWQ3 736 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 CSGALNACT2Q8N6G5 542 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 FSIP1Q8NA03 581 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 TTC16Q8NEE8 873 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 CCDC26Q8TAB7 109 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 SPATA18Q8TC71 538 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 TCEAL3Q969E4 200 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 ACCSQ96QU6 501 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 MRPL44Q9H9J2 332 aaKnown RBP17.29■□□□□ 0.36
PTPRU-210ENST00000527027 GDAP2Q9NXN4 497 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 SMC3Q9UQE7 1217 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 WNT6Q9Y6F9 365 aa17.29■□□□□ 0.36
PTPRU-210ENST00000527027 BCLAF3A2AJT9 711 aaKnown RBP17.28■□□□□ 0.36
PTPRU-210ENST00000527027 CAVIN2O95810 425 aa17.28■□□□□ 0.36
PTPRU-210ENST00000527027 DGKEP52429 567 aa17.28■□□□□ 0.36
PTPRU-210ENST00000527027 CREB5Q02930 508 aa17.28■□□□□ 0.36
PTPRU-210ENST00000527027 USP4Q13107 963 aa17.28■□□□□ 0.36
PTPRU-210ENST00000527027 L1TD1Q5T7N2 865 aaKnown RBP17.28■□□□□ 0.36
PTPRU-210ENST00000527027 SCARA3Q6AZY7 606 aa17.28■□□□□ 0.36
PTPRU-210ENST00000527027 BRAPQ7Z569 592 aa17.28■□□□□ 0.36
PTPRU-210ENST00000527027 OSTM1Q86WC4 334 aa17.28■□□□□ 0.36
PTPRU-210ENST00000527027 SPATA2LQ8IUW3 424 aaPredicted RBP17.28■□□□□ 0.36
PTPRU-210ENST00000527027 SCN4BQ8IWT1 228 aa17.28■□□□□ 0.36
PTPRU-210ENST00000527027 ARL14EPQ8N8R7 260 aaPredicted RBP17.28■□□□□ 0.36
PTPRU-210ENST00000527027 ZSWIM2Q8NEG5 633 aa17.28■□□□□ 0.36
PTPRU-210ENST00000527027 CXorf38Q8TB03 319 aa17.28■□□□□ 0.36
PTPRU-210ENST00000527027 SH3RF2Q8TEC5 729 aa17.28■□□□□ 0.36
PTPRU-210ENST00000527027 SAAL1Q96ER3 474 aa17.28■□□□□ 0.36
PTPRU-210ENST00000527027 FUBP3Q96I24 572 aaKnown RBP eCLIP17.28■□□□□ 0.36
PTPRU-210ENST00000527027 EPSTI1Q96J88 318 aa17.28■□□□□ 0.36
PTPRU-210ENST00000527027 LINC00597Q9H2U6 94 aa17.28■□□□□ 0.36
PTPRU-210ENST00000527027 RBAKQ9NYW8 714 aaPredicted RBP17.28■□□□□ 0.36
PTPRU-210ENST00000527027 GCNT4Q9P109 453 aa17.28■□□□□ 0.36
PTPRU-210ENST00000527027 STK17AQ9UEE5 414 aa17.28■□□□□ 0.36
PTPRU-210ENST00000527027 ITGA11Q9UKX5 1188 aa17.28■□□□□ 0.36
PTPRU-210ENST00000527027 SNX9Q9Y5X1 595 aa17.28■□□□□ 0.36
PTPRU-210ENST00000527027 GABRDO14764 452 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms