RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 DDX5P17844 614 aaKnown RBP12.87□□□□□ -0.35
FGFR1-227ENST00000526570 TAC1P20366 129 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 RFX1P22670 979 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 JAK3P52333 1124 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 COG2Q14746 738 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 DGCR14Q96DF8 476 aaKnown RBP12.87□□□□□ -0.35
FGFR1-227ENST00000526570 TMA16Q96EY4 203 aaKnown RBP12.87□□□□□ -0.35
FGFR1-227ENST00000526570 TMEM206Q9H813 350 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 C20orf96Q9NUD7 363 aaPredicted RBP12.87□□□□□ -0.35
FGFR1-227ENST00000526570 SFMBT1Q9UHJ3 866 aa12.87□□□□□ -0.35
FGFR1-227ENST00000526570 STK36Q9NRP7 1315 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 LRRN2O75325 713 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 SRGAP2BP0DMP2 458 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 SLC9A1P19634 815 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 EPHB2P29323 1055 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 GSTA3Q16772 222 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 ATP13A5Q4VNC0 1218 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 PPP4R4Q6NUP7 873 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 PPP1R18Q6NYC8 613 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 P3H2Q8IVL5 708 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 C4orf33Q8N1A6 199 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 MOV10Q9HCE1 1003 aaKnown RBP12.86□□□□□ -0.35
FGFR1-227ENST00000526570 ARHGEF38Q9NXL2 777 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 CACNA2D2Q9NY47 1150 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 DMGDHQ9UI17 866 aaKnown RBP12.86□□□□□ -0.35
FGFR1-227ENST00000526570 SMNDC1O75940 238 aaKnown RBP eCLIP12.86□□□□□ -0.35
FGFR1-227ENST00000526570 KRT1P04264 644 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 NUP62P37198 522 aaPredicted RBP12.86□□□□□ -0.35
FGFR1-227ENST00000526570 ERVK-24P63145 666 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 MTA1Q13330 715 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 PERM1Q5SV97 790 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 GRPEL2Q8TAA5 225 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 GTSE1Q9NYZ3 720 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 PCDHB4Q9Y5E5 795 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 TTLL13PA6NNM8 815 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 A8MXQ7 604 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 LVRNQ6Q4G3 990 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 FBXO33Q7Z6M2 555 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 GIMAP8Q8ND71 665 aaPredicted RBP12.86□□□□□ -0.35
FGFR1-227ENST00000526570 SLC39A3Q9BRY0 314 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 ZNF224Q9NZL3 707 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 KLRK1P26718 216 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 RPL5P46777 297 aaKnown RBP12.86□□□□□ -0.35
FGFR1-227ENST00000526570 TFAMQ00059 246 aaKnown RBP12.86□□□□□ -0.35
FGFR1-227ENST00000526570 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.86□□□□□ -0.35
FGFR1-227ENST00000526570 FOXD4Q12950 439 aaPredicted RBP12.86□□□□□ -0.35
FGFR1-227ENST00000526570 HHIPL2Q6UWX4 724 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.86□□□□□ -0.35
FGFR1-227ENST00000526570 FASTKD5Q7L8L6 764 aaKnown RBP12.86□□□□□ -0.35
FGFR1-227ENST00000526570 C11orf74Q86VG3 221 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 EPS8L3Q8TE67 593 aaKnown RBP12.86□□□□□ -0.35
FGFR1-227ENST00000526570 RSPH1Q8WYR4 309 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 MYOZ2Q9NPC6 264 aa12.86□□□□□ -0.35
FGFR1-227ENST00000526570 ZNF862O60290 1169 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 VAV1P15498 845 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 MFAP3P55082 362 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 NLRP11P59045 1033 aaKnown RBP12.85□□□□□ -0.35
FGFR1-227ENST00000526570 LRRC63Q05C16 580 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 TAF8Q7Z7C8 310 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 KBTBD2Q8IY47 623 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 SIPA1Q96FS4 1042 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 NT5C1BQ96P26 610 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 PACSIN1Q9BY11 444 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 ACAD9Q9H845 621 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 PCDH12Q9NPG4 1184 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 MYRFQ9Y2G1 1151 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 SLIT1O75093 1534 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 POTEMA6NI47 508 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 NPTXRO95502 500 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 TTKP33981 857 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 SARSP49591 514 aaKnown RBP12.85□□□□□ -0.35
FGFR1-227ENST00000526570 PRELPP51888 382 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 ARL6IP4Q66PJ3 421 aaKnown RBP12.85□□□□□ -0.35
FGFR1-227ENST00000526570 CNDP1Q96KN2 507 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 EMILIN3Q9NT22 766 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 MLXQ9UH92 298 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 AK9Q5TCS8 1911 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 SRRM3A6NNA2 597 aaPredicted RBP12.85□□□□□ -0.35
FGFR1-227ENST00000526570 NDUFB5O43674 189 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 FCER1AP12319 257 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 STAT3P40763 770 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 BPIFB4P59827 614 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 TRAP1Q12931 704 aaKnown RBP12.85□□□□□ -0.35
FGFR1-227ENST00000526570 CCDC157Q569K6 752 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 CHCHD4Q8N4Q1 142 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 RASSF5Q8WWW0 418 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 TATDN2Q93075 761 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 PLEKHG4BQ96PX9 1271 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 CELF4Q9BZC1 486 aaKnown RBP12.85□□□□□ -0.35
FGFR1-227ENST00000526570 ZNF609O15014 1411 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 A0A1W2PQ72 361 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 SNX2O60749 519 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 RFX5P48382 616 aaPredicted RBP12.85□□□□□ -0.35
FGFR1-227ENST00000526570 ATXN3P54252 364 aaPredicted RBP12.85□□□□□ -0.35
FGFR1-227ENST00000526570 EPS8Q12929 822 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 ZC2HC1CQ53FD0 456 aaPredicted RBP12.85□□□□□ -0.35
FGFR1-227ENST00000526570 NCCRP1Q6ZVX7 275 aaPredicted RBP12.85□□□□□ -0.35
FGFR1-227ENST00000526570 ZBED8Q8IZ13 594 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 TBATAQ96M53 351 aa12.85□□□□□ -0.35
FGFR1-227ENST00000526570 ZNF285Q96NJ3 590 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms