RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 TRIM6Q9C030 488 aaPredicted RBP11.81□□□□□ -0.52
NEDD8-204ENST00000526430 EXOC1Q9NV70 894 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 DMAC2Q9NW81 257 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 CDY1Q9Y6F8 540 aa11.81□□□□□ -0.52
NEDD8-204ENST00000526430 HEPACAM2A8MVW5 462 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 BIN1O00499 593 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 KHNYNO15037 678 aaKnown RBP11.8□□□□□ -0.52
NEDD8-204ENST00000526430 N4BP3O15049 544 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 ATG13O75143 517 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 ADRB2P07550 413 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 SOX9P48436 509 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 PXNP49023 591 aaPredicted RBP11.8□□□□□ -0.52
NEDD8-204ENST00000526430 WNT7BP56706 349 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 NCBP1Q09161 790 aaKnown RBP11.8□□□□□ -0.52
NEDD8-204ENST00000526430 STRN3Q13033 797 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 ALCAMQ13740 583 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 KNOP1Q1ED39 458 aaKnown RBP11.8□□□□□ -0.52
NEDD8-204ENST00000526430 XKR4Q5GH76 650 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 CYP4A22Q5TCH4 519 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 MPZL3Q6UWV2 235 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 NELFCDQ8IXH7 590 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 GUF1Q8N442 669 aaKnown RBP11.8□□□□□ -0.52
NEDD8-204ENST00000526430 LEMD2Q8NC56 503 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 ZNF461Q8TAF7 563 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 ZSCAN18Q8TBC5 510 aaPredicted RBP11.8□□□□□ -0.52
NEDD8-204ENST00000526430 FAM200AQ8TCP9 573 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 TMEM174Q8WUU8 243 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 CBWD1Q9BRT8 395 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 GPR88Q9GZN0 384 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 NUP62CLQ9H1M0 184 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 SLC32A1Q9H598 525 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 SCUBE2Q9NQ36 999 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 SNTG2Q9NY99 539 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 CACNG4Q9UBN1 327 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 CITO14578 2027 aa11.8□□□□□ -0.52
NEDD8-204ENST00000526430 ZNF462Q96JM2 2506 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 UPK3BL1B0FP48 263 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 UPK3BL2E5RIL1 263 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 TMEM189-UBE2V1I3L0A0 370 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 MOSPD3O75425 235 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 ABLIM3O94929 683 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 SMC2O95347 1197 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 MBD3O95983 291 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 MCF2P10911 925 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 AKAP5P24588 427 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 TNFSF9P41273 254 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 EPHA5P54756 1037 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 MCCD1P59942 119 aaPredicted RBP11.79□□□□□ -0.52
NEDD8-204ENST00000526430 C19orf57Q0VDD7 668 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 PON2Q15165 354 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 NAB2Q15742 525 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 KLHL40Q2TBA0 621 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 SLC10A6Q3KNW5 377 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 SCARA3Q6AZY7 606 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 CENPPQ6IPU0 288 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 SLC8B1Q6J4K2 584 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 ANKS3Q6ZW76 656 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 YAF2Q8IY57 180 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 TCEAL8Q8IYN2 117 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 TMEM130Q8N3G9 435 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 GZF1Q9H116 711 aaPredicted RBP11.79□□□□□ -0.52
NEDD8-204ENST00000526430 CPSF3Q9UKF6 684 aaKnown RBP11.79□□□□□ -0.52
NEDD8-204ENST00000526430 SLC8A2Q9UPR5 921 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 TRAF3IP3Q9Y228 551 aa11.79□□□□□ -0.52
NEDD8-204ENST00000526430 ANK1P16157 1881 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 SPTA1P02549 2419 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 CASTOR2A6NHX0 329 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 PDXKO00764 312 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 PRRG1O14668 218 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 PTGESO14684 152 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 HNRNPDLO14979 420 aaKnown RBP11.78□□□□□ -0.52
NEDD8-204ENST00000526430 CLIC2O15247 247 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 CLDN3O15551 220 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 ATF2P15336 505 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 IGFBP6P24592 240 aaPredicted RBP11.78□□□□□ -0.52
NEDD8-204ENST00000526430 ABCD1P33897 745 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 RDXP35241 583 aaKnown RBP11.78□□□□□ -0.52
NEDD8-204ENST00000526430 GRM5P41594 1212 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 LIG4P49917 911 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 ROR1Q01973 937 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 ZNF568Q3ZCX4 644 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 ANKRD40Q6AI12 368 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 PKN3Q6P5Z2 889 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 PIP4P1Q86T03 277 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 C12orf56Q8IXR9 622 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 ZMAT2Q96NC0 199 aaKnown RBP11.78□□□□□ -0.52
NEDD8-204ENST00000526430 FUCA2Q9BTY2 467 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 TMEM206Q9H813 350 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 AGPAT3Q9NRZ7 376 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 RMND1Q9NWS8 449 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 EVLQ9UI08 416 aaPredicted RBP11.78□□□□□ -0.52
NEDD8-204ENST00000526430 INSL5Q9Y5Q6 135 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 UBE4BO95155 1302 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 OBSL1O75147 1896 aa11.78□□□□□ -0.52
NEDD8-204ENST00000526430 UNC79Q9P2D8 2635 aa11.77□□□□□ -0.52
NEDD8-204ENST00000526430 CYSRT1A8MQ03 144 aa11.77□□□□□ -0.53
NEDD8-204ENST00000526430 GARTP22102 1010 aa11.77□□□□□ -0.53
NEDD8-204ENST00000526430 ELF1P32519 619 aa11.77□□□□□ -0.53
NEDD8-204ENST00000526430 ACOT2P49753 483 aa11.77□□□□□ -0.53
NEDD8-204ENST00000526430 OSTNP61366 133 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms