RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 PPP3CAQ08209 521 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 CHAF1AQ13111 956 aaPredicted RBP5.28□□□□□ -1.56
USP48-211ENST00000526044 RRP1BQ14684 758 aaKnown RBP5.28□□□□□ -1.56
USP48-211ENST00000526044 NOMO1Q15155 1222 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 TTF1Q15361 905 aaPredicted RBP5.28□□□□□ -1.56
USP48-211ENST00000526044 TTC22Q5TAA0 569 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 TSHZ3Q63HK5 1081 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 RNF207Q6ZRF8 634 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 Q6ZRM9 215 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 MB21D1Q8N884 522 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 SPATA5Q8NB90 893 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 ATXN2LQ8WWM7 1075 aaKnown RBP5.28□□□□□ -1.56
USP48-211ENST00000526044 EVI5LQ96CN4 794 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 FUBP3Q96I24 572 aaKnown RBP eCLIP5.28□□□□□ -1.56
USP48-211ENST00000526044 GPR87Q9BY21 358 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 DBNDD1Q9H9R9 158 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 HMG20BQ9P0W2 317 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 TRPS1Q9UHF7 1281 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 ZNF609O15014 1411 aa5.28□□□□□ -1.56
USP48-211ENST00000526044 MYH13Q9UKX3 1938 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 hCG_2014768A0A024R1R8 64 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 GOLIM4O00461 696 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 SBF1O95248 1867 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 SLPIP03973 132 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 PTPN7P35236 360 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 RABGGTBP53611 331 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 PER3P56645 1201 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 ANAPC15P60006 121 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 KRT85P78386 507 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 LTBP1Q14766 1721 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 TNIP1Q15025 636 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 ACAP2Q15057 778 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 ABCB5Q2M3G0 1257 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 DCAF17Q5H9S7 520 aaPredicted RBP5.27□□□□□ -1.57
USP48-211ENST00000526044 STRIP1Q5VSL9 837 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 Q6ZVL8 140 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 DOK3Q7L591 496 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 TMPRSS6Q8IU80 811 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 EXOC8Q8IYI6 725 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 CNTROBQ8N137 903 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 ZGPATQ8N5A5 531 aaKnown RBP5.27□□□□□ -1.57
USP48-211ENST00000526044 PPM1NQ8N819 430 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 OR7D4Q8NG98 312 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 IL17DQ8TAD2 202 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 MDM1Q8TC05 714 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 SNED1Q8TER0 1413 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 TBC1D22AQ8WUA7 517 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 ARAP2Q8WZ64 1704 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 JADE3Q92613 823 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 MNTQ99583 582 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 ZNF703Q9H7S9 590 aaPredicted RBP5.27□□□□□ -1.57
USP48-211ENST00000526044 DMRT3Q9NQL9 472 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 PAG1Q9NWQ8 432 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 KLHL42Q9P2K6 505 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 ABCF2Q9UG63 623 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 DNM3Q9UQ16 869 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 CLCA2Q9UQC9 943 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 SPEF1Q9Y4P9 236 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 AKAP11Q9UKA4 1901 aa5.27□□□□□ -1.57
USP48-211ENST00000526044 FAM205AQ6ZU69 1335 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 A0A0U1RQG5 324 aaPredicted RBP5.26□□□□□ -1.57
USP48-211ENST00000526044 YDJCA8MPS7 323 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 FAM171A2A8MVW0 826 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 PRR5-ARHGAP8B1AHC4 643 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 B5MCH6 92 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 IDH1O75874 414 aaKnown RBP5.26□□□□□ -1.57
USP48-211ENST00000526044 ENDOD1O94919 500 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 AMHP03971 560 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 ACVRL1P37023 503 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 FKBP1AP62942 108 aaKnown RBP5.26□□□□□ -1.57
USP48-211ENST00000526044 CXCL9Q07325 125 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 MGAT2Q10469 447 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 FOXE3Q13461 319 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 PCBP2Q15366 365 aaKnown RBP eCLIP5.26□□□□□ -1.57
USP48-211ENST00000526044 BMP2KLQ5H9B9 411 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 CRB2Q5IJ48 1285 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 FAM47AQ5JRC9 791 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 PRAMEF14Q5SWL7 426 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 NAIF1Q69YI7 327 aaPredicted RBP5.26□□□□□ -1.57
USP48-211ENST00000526044 ZSCAN25Q6NSZ9 544 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 HTR3DQ70Z44 454 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 PQLC1Q8N2U9 271 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 KBTBD3Q8NAB2 608 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 EDC3Q96F86 508 aaKnown RBP5.26□□□□□ -1.57
USP48-211ENST00000526044 UHRF1Q96T88 793 aaPredicted RBP5.26□□□□□ -1.57
USP48-211ENST00000526044 FSD1Q9BTV5 496 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 LSM14BQ9BX40 385 aaKnown RBP5.26□□□□□ -1.57
USP48-211ENST00000526044 ASPSCR1Q9BZE9 553 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.26□□□□□ -1.575e-11■□□□□ 10.5
USP48-211ENST00000526044 PARPBPQ9NWS1 579 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 RAI14Q9P0K7 980 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 RNF181Q9P0P0 153 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 AK9Q5TCS8 1911 aa5.26□□□□□ -1.57
USP48-211ENST00000526044 DICER1Q9UPY3 1922 aaKnown RBP5.26□□□□□ -1.57
USP48-211ENST00000526044 TNKSO95271 1327 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 PDS5AQ29RF7 1337 aaKnown RBP5.25□□□□□ -1.57
USP48-211ENST00000526044 SALL1Q9NSC2 1324 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 DUOX1Q9NRD9 1551 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 FZD9O00144 591 aa5.25□□□□□ -1.57
USP48-211ENST00000526044 HIP1O00291 1037 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms