RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 DDX43Q9NXZ2 648 aaKnown RBP7.08□□□□□ -1.28
CD44-221ENST00000526000 DSEQ9UL01 958 aa7.08□□□□□ -1.28
CD44-221ENST00000526000 KIF3AQ9Y496 699 aa7.08□□□□□ -1.28
CD44-221ENST00000526000 PATJQ8NI35 1801 aa7.08□□□□□ -1.28
CD44-221ENST00000526000 RALGAPA1Q6GYQ0 2036 aa7.08□□□□□ -1.28
CD44-221ENST00000526000 GON4LQ3T8J9 2241 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 BCLAF3A2AJT9 711 aaKnown RBP7.07□□□□□ -1.28
CD44-221ENST00000526000 HUS1O60921 280 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 TADA3O75528 432 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 RHOBTB1O94844 696 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 APBB3O95704 486 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 PIGRP01833 764 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 ITGB3P05106 788 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 CKMP06732 381 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 HOXB3P14651 431 aaPredicted RBP7.07□□□□□ -1.28
CD44-221ENST00000526000 HDCP19113 662 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 DRD1P21728 446 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 LMO2P25791 158 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 ADSSP30520 456 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 PSMC1P62191 440 aaKnown RBP7.07□□□□□ -1.28
CD44-221ENST00000526000 IRX4P78413 519 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 GTF2BQ00403 316 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 CEBPZQ03701 1054 aaKnown RBP7.07□□□□□ -1.28
CD44-221ENST00000526000 IFRD2Q12894 506 aaPredicted RBP7.07□□□□□ -1.28
CD44-221ENST00000526000 MTF1Q14872 753 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 ELF2Q15723 593 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 SV2CQ496J9 727 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 PLA2G2CQ5R387 149 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 SH3PXD2AQ5TCZ1 1133 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 SLFN12LQ6IEE8 588 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 ANO7Q6IWH7 933 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 ZNF720Q7Z2F6 126 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 SPATA2LQ8IUW3 424 aaPredicted RBP7.07□□□□□ -1.28
CD44-221ENST00000526000 HSCBQ8IWL3 235 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 CPA6Q8N4T0 437 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 KRI1Q8N9T8 703 aaKnown RBP7.07□□□□□ -1.28
CD44-221ENST00000526000 TSTD1Q8NFU3 115 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 DDX1Q92499 740 aaKnown RBP7.07□□□□□ -1.28
CD44-221ENST00000526000 INTS4Q96HW7 963 aaKnown RBP7.07□□□□□ -1.28
CD44-221ENST00000526000 EPSTI1Q96J88 318 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 LOXL4Q96JB6 756 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 TMX3Q96JJ7 454 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 FIZ1Q96SL8 496 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 ASB7Q9H672 318 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 PDE11AQ9HCR9 933 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 FSCN3Q9NQT6 498 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 VPS45Q9NRW7 570 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 SMPD4Q9NXE4 827 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 DAXXQ9UER7 740 aaPredicted RBP7.07□□□□□ -1.28
CD44-221ENST00000526000 ODF2LQ9ULJ1 636 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 L1RE1Q9UN81 338 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.07□□□□□ -1.28
CD44-221ENST00000526000 SNX9Q9Y5X1 595 aa7.07□□□□□ -1.28
CD44-221ENST00000526000 ABCA7Q8IZY2 2146 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 TRAV19A0A0A6YYK7 116 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 MYMKA6NI61 221 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 K7ELQ4 463 aaPredicted RBP7.06□□□□□ -1.28
CD44-221ENST00000526000 MAP3K13O43283 966 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 PRPF6O94906 941 aaKnown RBP7.06□□□□□ -1.28
CD44-221ENST00000526000 GCNT3O95395 438 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 CD2BP2O95400 341 aaKnown RBP7.06□□□□□ -1.28
CD44-221ENST00000526000 USP17L7P0C7H9 530 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 IDEP14735 1019 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 HNRNPLP14866 589 aaKnown RBP eCLIP7.06□□□□□ -1.28
CD44-221ENST00000526000 BDNFP23560 247 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 WEE1P30291 646 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 TIE1P35590 1138 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 DDIT3P35638 169 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 GRIK1P39086 918 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 WASP42768 502 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 MAPK8P45983 427 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 ZNF131P52739 623 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 LIMK1P53667 647 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 USP46P62068 366 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 RPL10AP62906 217 aaKnown RBP7.06□□□□□ -1.28
CD44-221ENST00000526000 AMPD2Q01433 879 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 FAM160A1Q05DH4 1040 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 ZNF252P-AS1Q0IIN9 211 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 MESP2Q0VG99 397 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 NR1H3Q13133 447 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 PDGFRLQ15198 375 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 SF3A1Q15459 793 aaKnown RBP7.06□□□□□ -1.28
CD44-221ENST00000526000 EML3Q32P44 896 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 USP39Q53GS9 565 aaKnown RBP7.06□□□□□ -1.28
CD44-221ENST00000526000 LARP1BQ659C4 914 aaKnown RBP7.06□□□□□ -1.28
CD44-221ENST00000526000 FAM173BQ6P4H8 233 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 TMEFF1Q8IYR6 380 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 SYCP3Q8IZU3 236 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 PGBD3Q8N328 593 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 CAMKK1Q8N5S9 505 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 C1orf127Q8N9H9 656 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 DEFB124Q8NES8 71 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 C2orf15Q8WU43 125 aaKnown RBP7.06□□□□□ -1.28
CD44-221ENST00000526000 OSCP1Q8WVF1 389 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 LARP4BQ92615 738 aaKnown RBP7.06□□□□□ -1.28
CD44-221ENST00000526000 ZC3H10Q96K80 434 aaKnown RBP7.06□□□□□ -1.28
CD44-221ENST00000526000 CLIC6Q96NY7 704 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 TSPAN18Q96SJ8 248 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 MRPL44Q9H9J2 332 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms