RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 CCNB3Q8WWL7 1395 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 SCAPERQ9BY12 1400 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 ZFYVE16Q7Z3T8 1539 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 KIAA0355O15063 1070 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 UNC5CO95185 931 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 KIF20AO95235 890 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 HRGP04196 525 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 GRPP07492 148 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 ITGAMP11215 1152 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 FCER1AP12319 257 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 SUMO3P55854 103 aaPredicted RBP4.73□□□□□ -1.65
CD44-219ENST00000525685 FPGSQ05932 587 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 HDAC1Q13547 482 aaPredicted RBP4.73□□□□□ -1.65
CD44-219ENST00000525685 POLD3Q15054 466 aaPredicted RBP4.73□□□□□ -1.65
CD44-219ENST00000525685 LMBRD2Q68DH5 695 aaPredicted RBP4.73□□□□□ -1.65
CD44-219ENST00000525685 DPY19L2P1Q6NXN4 242 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 APOA5Q6Q788 366 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 GPR149Q86SP6 731 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 COL23A1Q86Y22 540 aaPredicted RBP4.73□□□□□ -1.65
CD44-219ENST00000525685 CFAP52Q8N1V2 620 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 FAM46DQ8NEK8 389 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 PJA1Q8NG27 643 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 IL31RAQ8NI17 732 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 TRIB1Q96RU8 372 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 TINAGL1Q9GZM7 467 aaPredicted RBP4.73□□□□□ -1.65
CD44-219ENST00000525685 BHMT2Q9H2M3 363 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 ARNT2Q9HBZ2 717 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 TMEM74BQ9NUR3 256 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 ZSCAN32Q9NX65 697 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 TMX2Q9Y320 296 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 CAMSAP2Q08AD1 1489 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 HECW2Q9P2P5 1572 aa4.73□□□□□ -1.65
CD44-219ENST00000525685 INO80Q9ULG1 1556 aaPredicted RBP4.73□□□□□ -1.65
CD44-219ENST00000525685 MAST3O60307 1309 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 MYOM3Q5VTT5 1437 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 ABCA6Q8N139 1617 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 SIGLEC1Q9BZZ2 1709 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 ESRRBO95718 433 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 THP07101 528 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 MYL3P08590 195 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 TRIM27P14373 513 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 NPR1P16066 1061 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 FBLP22087 321 aaKnown RBP4.72□□□□□ -1.65
CD44-219ENST00000525685 MPLP40238 635 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 CXADRP78310 365 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 SLC13A2Q13183 592 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 RAB32Q13637 225 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 PRR16Q569H4 304 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 EMC10Q5UCC4 262 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 FAM160B1Q5W0V3 765 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 TAPT1Q6NXT6 567 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 CLNKQ7Z7G1 428 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 COLGALT2Q8IYK4 626 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 FAM43AQ8N2R8 423 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 BOD1Q96IK1 185 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 MOGAT1Q96PD6 335 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 BBC3Q96PG8 261 aaPredicted RBP4.72□□□□□ -1.65
CD44-219ENST00000525685 PRDM13Q9H4Q3 707 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 GPR35Q9HC97 309 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 ALG13Q9NP73 1137 aaKnown RBP4.72□□□□□ -1.65
CD44-219ENST00000525685 TESQ9UGI8 421 aaKnown RBP4.72□□□□□ -1.65
CD44-219ENST00000525685 KCNE5Q9UJ90 142 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 NEU2Q9Y3R4 380 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 PLEKHM1Q9Y4G2 1056 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 ZNF518AQ6AHZ1 1483 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 PLEKHH2Q8IVE3 1493 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 DIP2CQ9Y2E4 1556 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 PCSK5Q92824 1860 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 YEATS2Q9ULM3 1422 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 TRAPPC8Q9Y2L5 1435 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 USP19O94966 1318 aa4.72□□□□□ -1.65
CD44-219ENST00000525685 ARHGEF5Q12774 1597 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 MBD5Q9P267 1494 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 CCDC195A0A1B0GUA6 201 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 RHPN2P1A8MT19 583 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 ISM1B1AKI9 464 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 BTN3A1O00481 513 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 APAF1O14727 1248 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 PMM2O15305 246 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 IFIT2P09913 472 aaKnown RBP4.71□□□□□ -1.66
CD44-219ENST00000525685 MYF5P13349 255 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 CHRM3P20309 590 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 ITGALP20701 1170 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 FDXRP22570 491 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 POU6F2P78424 691 aaPredicted RBP4.71□□□□□ -1.66
CD44-219ENST00000525685 SLFN5Q08AF3 891 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 IFIT5Q13325 482 aaKnown RBP4.71□□□□□ -1.66
CD44-219ENST00000525685 MPP3Q13368 585 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 BRD3Q15059 726 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 CNGA2Q16280 664 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 MAP9Q49MG5 647 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 STRIP1Q5VSL9 837 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 SWSAP1Q6NVH7 229 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 C11orf96Q7Z7L8 435 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 SLC44A3Q8N4M1 653 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 SLC15A4Q8N697 577 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 KBTBD7Q8WVZ9 684 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 TMEM125Q96AQ2 219 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 NACC2Q96BF6 587 aa4.71□□□□□ -1.66
CD44-219ENST00000525685 APIPQ96GX9 242 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms