RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 DSG3P32926 999 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 VAC14Q08AM6 782 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 SPANXN2Q5MJ10 180 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 ZMYM1Q5SVZ6 1142 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 SPATA2LQ8IUW3 424 aaPredicted RBP14.19□□□□□ -0.14
LRRK1-202ENST00000525284 TRIM48Q8IWZ4 208 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 MCPH1Q8NEM0 835 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 SHANK2Q9UPX8 1470 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 CCDC130P13994 396 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 AGBL2Q5U5Z8 902 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 KBTBD2Q8IY47 623 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 FAM172AQ8WUF8 416 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 HEY2Q9UBP5 337 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 PCDHA6Q9UN73 950 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 PCDHA8Q9Y5H6 950 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 DENND4BO75064 1496 aaPredicted RBP14.19□□□□□ -0.14
LRRK1-202ENST00000525284 AHCYL1O43865 530 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 ATG7O95352 703 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 NQO1P15559 274 aaKnown RBP14.19□□□□□ -0.14
LRRK1-202ENST00000525284 ADARP55265 1226 aaKnown RBP14.19□□□□□ -0.14
LRRK1-202ENST00000525284 BTN3A2P78410 334 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 R3HDM1Q15032 1099 aaKnown RBP14.19□□□□□ -0.14
LRRK1-202ENST00000525284 BNC2Q6ZN30 1099 aaPredicted RBP14.19□□□□□ -0.14
LRRK1-202ENST00000525284 NECAB2Q7Z6G3 386 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 B3GALNT2Q8NCR0 500 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 ZNF671Q8TAW3 534 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 CNKSR1Q969H4 720 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 S100A13Q99584 98 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 SLITRK2Q9H156 845 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 TMEM138Q9NPI0 162 aa14.19□□□□□ -0.14
LRRK1-202ENST00000525284 PFASO15067 1338 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 EEF2KO00418 725 aaKnown RBP14.18□□□□□ -0.14
LRRK1-202ENST00000525284 TEX33O43247 280 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 SOAT2O75908 522 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 PRR29P0C7W0 189 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 PPIDQ08752 370 aaKnown RBP14.18□□□□□ -0.14
LRRK1-202ENST00000525284 KBTBD12Q3ZCT8 623 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 ESRP1Q6NXG1 681 aaKnown RBP14.18□□□□□ -0.14
LRRK1-202ENST00000525284 SIK3Q9Y2K2 1263 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 POLR1DQ9Y2S0 133 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 ABCB11O95342 1321 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 EMSYQ7Z589 1322 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 PTPN1P18031 435 aaKnown RBP14.18□□□□□ -0.14
LRRK1-202ENST00000525284 WARSP23381 471 aaKnown RBP14.18□□□□□ -0.14
LRRK1-202ENST00000525284 SLC1A1P43005 524 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 SDE2Q6IQ49 451 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 PMF1Q6P1K2 205 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 NR5A2O00482 541 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 RTN2O75298 545 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 SUPT7LO94864 414 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 MAGEA4P43358 317 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 ORC2Q13416 577 aaPredicted RBP14.18□□□□□ -0.14
LRRK1-202ENST00000525284 SUPT20HL1Q3ZLR7 823 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 CLVS1Q8IUQ0 354 aaPredicted RBP14.18□□□□□ -0.14
LRRK1-202ENST00000525284 GREM2Q9H772 168 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 COPS7BQ9H9Q2 264 aaPredicted RBP14.18□□□□□ -0.14
LRRK1-202ENST00000525284 RBAKQ9NYW8 714 aaPredicted RBP14.18□□□□□ -0.14
LRRK1-202ENST00000525284 PCDHGA4Q9Y5G9 962 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 EIF4G3O43432 1585 aaKnown RBP14.18□□□□□ -0.14
LRRK1-202ENST00000525284 SSNA1O43805 119 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 PLEKHA8P1O95397 391 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 PURAQ00577 322 aaKnown RBP14.18□□□□□ -0.14
LRRK1-202ENST00000525284 GRSF1Q12849 480 aaKnown RBP eCLIP14.18□□□□□ -0.14
LRRK1-202ENST00000525284 FBXO42Q6P3S6 717 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 RASGRP2Q7LDG7 609 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 DHX40Q8IX18 779 aaKnown RBP14.18□□□□□ -0.14
LRRK1-202ENST00000525284 MLPHQ9BV36 600 aaPredicted RBP14.18□□□□□ -0.14
LRRK1-202ENST00000525284 TMEM117Q9H0C3 514 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 DBNDD1Q9H9R9 158 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 ZBTB1Q9Y2K1 713 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 EIF2B5Q13144 721 aaKnown RBP14.18□□□□□ -0.14
LRRK1-202ENST00000525284 CLEC16AQ2KHT3 1053 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 SLC13A5Q86YT5 568 aaPredicted RBP14.18□□□□□ -0.14
LRRK1-202ENST00000525284 SLC35G2Q8TBE7 412 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 WDR24Q96S15 920 aa14.18□□□□□ -0.14
LRRK1-202ENST00000525284 PUS3Q9BZE2 481 aaKnown RBP14.18□□□□□ -0.14
LRRK1-202ENST00000525284 POLR3FQ9H1D9 316 aaPredicted RBP14.18□□□□□ -0.14
LRRK1-202ENST00000525284 ECDO95905 644 aaPredicted RBP14.17□□□□□ -0.14
LRRK1-202ENST00000525284 ITGADQ13349 1161 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 DGUOKQ16854 277 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 CHID1Q9BWS9 393 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 ILKAPQ9H0C8 392 aaPredicted RBP14.17□□□□□ -0.14
LRRK1-202ENST00000525284 FAM58BPP0C7Q3 252 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 CASP4P49662 377 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 PSMD4P55036 377 aaKnown RBP14.17□□□□□ -0.14
LRRK1-202ENST00000525284 NRG3P56975 720 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 EFCAB1Q9HAE3 211 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 ZSWIM5Q9P217 1185 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 FBXO40Q9UH90 709 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 RNF112Q9ULX5 631 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 THRAP10827 490 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 ATP6AP1LQ52LC2 224 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 MMGT1Q8N4V1 131 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 KCNB2Q92953 911 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 RMI1Q9H9A7 625 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 ZNF302Q9NR11 478 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 NPATQ14207 1427 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 CHL1O00533 1208 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 ERMARDQ5T6L9 678 aa14.17□□□□□ -0.14
LRRK1-202ENST00000525284 TMEM26Q6ZUK4 368 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms