RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 FGF19O95750 216 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 HLA-DRAP01903 254 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 F11P03951 625 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 KRT13P13646 458 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 PTPN1P18031 435 aaKnown RBP13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 AOC1P19801 751 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 CD72P21854 359 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 BDNFP23560 247 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 GDI1P31150 447 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 PIK3CAP42336 1068 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 GCLMP48507 274 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 PPP3CAQ08209 521 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 TCF15Q12870 199 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 SGSM1Q2NKQ1 1148 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 CFAP221Q4G0U5 840 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 ARHGAP15Q53QZ3 475 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 SPOPLQ6IQ16 392 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 C4orf50Q6ZRC1 276 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 TMEM150AQ86TG1 271 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 SPATA20Q8TB22 786 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 MYCBPAPQ8TBZ2 947 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 PCED1BQ96HM7 432 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 GCNAQ96QF7 691 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 FOXQ1Q9C009 403 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 SMG9Q9H0W8 520 aaKnown RBP13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 KCNH6Q9H252 994 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 BRD9Q9H8M2 597 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 CHMP5Q9NZZ3 219 aa13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 HOOK1Q9UJC3 728 aaKnown RBP13.72□□□□□ -0.21
TRAPPC4-205ENST00000525079 TRIM49BA6NDI0 452 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 H0Y858 1186 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 IKBKBO14920 756 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 MAPK13O15264 365 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 LRRN2O75325 713 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 DCNP07585 359 aaKnown RBP13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 FAM163BP0C2L3 166 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 CSH1P0DML2 217 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 CSH2P0DML3 217 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 CDC25CP30307 473 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 GRIK1P39086 918 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 PMS1P54277 932 aaKnown RBP13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 NLRP12P59046 1061 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 PFKPQ01813 784 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 NHLH1Q02575 133 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 MLF2Q15773 248 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 EDRF1Q3B7T1 1238 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 ANKRD40Q6AI12 368 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 INTS8Q75QN2 995 aaKnown RBP13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 MAB21L3Q8N8X9 362 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 FUBP3Q96I24 572 aaKnown RBP eCLIP13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 LRRC3BQ96PB8 259 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 SLC46A2Q9BY10 475 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 TASP1Q9H6P5 420 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 VRTNQ9H8Y1 702 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 TRPV4Q9HBA0 871 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 HEBP1Q9NRV9 189 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 MAN1B1Q9UKM7 699 aa13.71□□□□□ -0.21
TRAPPC4-205ENST00000525079 BIN1O00499 593 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 CLDN5O00501 218 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 DPYSL4O14531 572 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 ZNF263O14978 683 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 CETN3O15182 167 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 GALR2O43603 387 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 NOL4O94818 638 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 PRAMEF12O95522 483 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 CD44P16070 742 aaKnown RBP13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 PSMC3P17980 439 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 MAGEA11P43364 429 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 PTPN5P54829 565 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 STARD6P59095 220 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 ORC1Q13415 861 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 MAPRE1Q15691 268 aaKnown RBP13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 TXNDC8Q6A555 127 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 PHLDB3Q6NSJ2 640 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 TPRG1Q6ZUI0 275 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 MFSD6LQ8IWD5 586 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 YAF2Q8IY57 180 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 ADSSL1Q8N142 457 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 B3GALNT2Q8NCR0 500 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 TAS1R2Q8TE23 839 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 SHDQ96IW2 340 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 PRRX2Q99811 253 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 TSG101Q99816 390 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 B3GNT5Q9BYG0 378 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 ZNF518BQ9C0D4 1074 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 FAM86C1Q9NVL1 165 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 SIT1Q9Y3P8 196 aa13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 MTF2Q9Y483 593 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC4-205ENST00000525079 ASS1P00966 412 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 EPB41P11171 864 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 ANXA13P27216 316 aa13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 ANP32AP39687 249 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 CACNA2D1P54289 1103 aa13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 PRKCQQ04759 706 aa13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 UBXN2BQ14CS0 331 aa13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 COBLL1Q53SF7 1204 aa13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 ACOT1Q86TX2 421 aa13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 DTWD2Q8NBA8 298 aa13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 TTC8Q8TAM2 541 aa13.69□□□□□ -0.22
TRAPPC4-205ENST00000525079 DEPDC1BQ8WUY9 529 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms